RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 FAM92BQ6ZTR7 304 aa16.82■□□□□ 0.28
SREK1-216ENST00000612404 CLNKQ7Z7G1 428 aa16.82■□□□□ 0.28
SREK1-216ENST00000612404 OR6C4Q8NGE1 309 aa16.82■□□□□ 0.28
SREK1-216ENST00000612404 TGM7Q96PF1 710 aa16.82■□□□□ 0.28
SREK1-216ENST00000612404 NT5DC2Q9H857 520 aa16.82■□□□□ 0.28
SREK1-216ENST00000612404 DMRT3Q9NQL9 472 aa16.82■□□□□ 0.28
SREK1-216ENST00000612404 FAM86C1Q9NVL1 165 aa16.82■□□□□ 0.28
SREK1-216ENST00000612404 VPS29Q9UBQ0 182 aa16.82■□□□□ 0.28
SREK1-216ENST00000612404 BTBD3Q9Y2F9 522 aa16.82■□□□□ 0.28
SREK1-216ENST00000612404 RP1P56715 2156 aa16.82■□□□□ 0.28
SREK1-216ENST00000612404 LY6G6EA0A0G2JKS1 128 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 SERTM1A2A2V5 107 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 FOXE1O00358 373 aaPredicted RBP16.81■□□□□ 0.28
SREK1-216ENST00000612404 TNFSF14O43557 240 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 DUX1O43812 170 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 RSL1D1O76021 490 aaKnown RBP16.81■□□□□ 0.28
SREK1-216ENST00000612404 TGFB1P01137 390 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 PRR35P0CG20 571 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 BCL6P41182 706 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 RPL38P63173 70 aaKnown RBP16.81■□□□□ 0.28
SREK1-216ENST00000612404 SPEM2Q0P670 501 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 C6orf89Q6UWU4 347 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 VN1R5Q7Z5H4 357 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 ZUFSPQ96AP4 578 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 RHBGQ9H310 441 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 C1orf109Q9NX04 203 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 U3KQA8 63 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 B4GAT1O43505 415 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 ETHE1O95571 254 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 ALDOCP09972 364 aaKnown RBP16.81■□□□□ 0.28
SREK1-216ENST00000612404 ZNF883P0CG24 379 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 SCTRP47872 440 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 GFERP55789 205 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 ERVK-8P63133 956 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 DAB2P98082 770 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 NAA25Q14CX7 972 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 RFTN2Q52LD8 501 aaPredicted RBP16.81■□□□□ 0.28
SREK1-216ENST00000612404 FCRL6Q6DN72 434 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 CHSY3Q70JA7 882 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 SPATA19Q7Z5L4 167 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 SEMA6CQ9H3T2 930 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 EPB41L1Q9H4G0 881 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 KLHL3Q9UH77 587 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 ADGRE2Q9UHX3 823 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 TSC22D4Q9Y3Q8 395 aa16.81■□□□□ 0.28
SREK1-216ENST00000612404 COPG1Q9Y678 874 aaKnown RBP16.81■□□□□ 0.28
SREK1-216ENST00000612404 OR2A25A4D2G3 310 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 PRAMEF10O60809 474 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 EZRP15311 586 aaKnown RBP16.8■□□□□ 0.28
SREK1-216ENST00000612404 GPLD1P80108 840 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 NR1D2Q14995 579 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 OGFOD2Q6N063 350 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 USP53Q70EK8 1073 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 SPRED1Q7Z699 444 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 TTLQ8NG68 377 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 BAHD1Q8TBE0 780 aaPredicted RBP16.8■□□□□ 0.28
SREK1-216ENST00000612404 CMTM7Q96FZ5 175 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 ZDHHC12Q96GR4 267 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 FCRL4Q96PJ5 515 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 MAP3K3Q99759 626 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 OR51B5Q9H339 312 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 DNAAF2Q9NVR5 837 aaKnown RBP16.8■□□□□ 0.28
SREK1-216ENST00000612404 NMRK1Q9NWW6 199 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 ANKMY1Q9P2S6 941 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 UNC13CQ8NB66 2214 aa16.8■□□□□ 0.28
SREK1-216ENST00000612404 SAP18O00422 153 aaKnown RBP16.79■□□□□ 0.28
SREK1-216ENST00000612404 KIF1CO43896 1103 aaKnown RBP16.79■□□□□ 0.28
SREK1-216ENST00000612404 CTSVO60911 334 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 STATHP02808 62 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 ST6GAL1P15907 406 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 SERPINB1P30740 379 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 GRK6P43250 576 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 DIO3P55073 304 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 RPS15AP62244 130 aaKnown RBP16.79■□□□□ 0.28
SREK1-216ENST00000612404 INAVAQ3KP66 663 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 PERM1Q5SV97 790 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 ZFAND4Q86XD8 727 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 APIPQ96GX9 242 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 MRPL1Q9BYD6 325 aaKnown RBP16.79■□□□□ 0.28
SREK1-216ENST00000612404 NCDNQ9UBB6 729 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 POLR3HQ9Y535 204 aaPredicted RBP16.79■□□□□ 0.28
SREK1-216ENST00000612404 PCDHGA4Q9Y5G9 962 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 MDC1Q14676 2089 aaKnown RBP16.79■□□□□ 0.28
SREK1-216ENST00000612404 EME2A4GXA9 379 aaPredicted RBP16.79■□□□□ 0.28
SREK1-216ENST00000612404 SLC9B1P1A6NJY1 282 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 RASSF9O75901 435 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 PNLIPP16233 465 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 PTX3P26022 381 aaPredicted RBP16.79■□□□□ 0.28
SREK1-216ENST00000612404 NME5P56597 212 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 STX1BP61266 288 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 EMX2Q04743 252 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 MAD2L1Q13257 205 aaPredicted RBP16.79■□□□□ 0.28
SREK1-216ENST00000612404 RPS6KA2Q15349 733 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 ZNF771Q7L3S4 317 aaPredicted RBP16.79■□□□□ 0.28
SREK1-216ENST00000612404 MFSD9Q8NBP5 474 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 NAT6Q93015 286 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 SERPINI1Q99574 410 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 C1GALT1Q9NS00 363 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 PCDHGB2Q9Y5G2 931 aa16.79■□□□□ 0.28
SREK1-216ENST00000612404 KLK4Q9Y5K2 254 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms