RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 SERPINB1P30740 379 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 AVPR1BP47901 424 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 ARRB1P49407 418 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 CRISP3P54108 245 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 MTTPP55157 894 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 DSTNP60981 165 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 KCNC3Q14003 757 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 LASP1Q14847 261 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 SHHQ15465 462 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 SNAPC1Q16533 368 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 LIPJQ5W064 366 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 EGFLAMQ63HQ2 1017 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 TRPV3Q8NET8 790 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 DNAJB8Q8NHS0 232 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 FBXO27Q8NI29 283 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 PIH1D2Q8WWB5 315 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 MYDGFQ969H8 173 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 ISG20Q96AZ6 181 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 ZNF689Q96CS4 500 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 MTERF3Q96E29 417 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 SORT1Q99523 831 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 PKP4Q99569 1192 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 GTPBP2Q9BX10 602 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 EPB41L1Q9H4G0 881 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 IL21RQ9HBE5 538 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 TMEM27Q9HBJ8 222 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 FARSBQ9NSD9 589 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 DNAJB9Q9UBS3 223 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 RAB26Q9ULW5 256 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 PAPPA2Q9BXP8 1791 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 IGLV3-10A0A075B6K4 115 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 GNB5O14775 395 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 KIAA0355O15063 1070 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 NME6O75414 186 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 BCHEP06276 602 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 DBTP11182 482 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 HOXC13P31276 330 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 CCR7P32248 378 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 TTKP33981 857 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 CLK3P49761 638 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 CDK9P50750 372 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 CDK6Q00534 326 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 RPL6Q02878 288 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 ABHD18Q0P651 414 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 CEACAM7Q14002 265 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 NR1D2Q14995 579 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 LAPTM4AQ15012 233 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 GPR68Q15743 365 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 PDCD4Q53EL6 469 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 CGB2Q6NT52 195 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 CDC73Q6P1J9 531 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 AHSA2Q719I0 299 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 PEX5LQ8IYB4 626 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 SAMD14Q8IZD0 417 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 SLC34A3Q8N130 599 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 TEX26Q8N6G2 289 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 FOXJ1Q92949 421 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 BIRC7Q96CA5 298 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 RNF31Q96EP0 1072 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 MRPL48Q96GC5 212 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 CDCA3Q99618 268 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 FAM83CQ9BQN1 747 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 WDR83Q9BRX9 315 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 RBCK1Q9BYM8 510 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 MRPS26Q9BYN8 205 aaKnown RBP7.04□□□□□ -1.28
CSDE1-218ENST00000610726 C20orf27Q9GZN8 174 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 NUAK2Q9H093 628 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 AIG1Q9NVV5 245 aa7.04□□□□□ -1.28
CSDE1-218ENST00000610726 BRWD1Q9NSI6 2320 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 OR52A4PA6NMU1 304 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 FAM25AB3EWG3 89 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 FAM25CB3EWG5 89 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 FAM25GB3EWG6 89 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CREG1O75629 220 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 BCAS2O75934 225 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 FADS2O95864 444 aaKnown RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 ASGR2P07307 311 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 JUPP14923 745 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 MAGEA3P43357 314 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 MAGEA10P43363 369 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 RANBP1P43487 201 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CLDN2P57739 230 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 FAM180BQ6P0A1 224 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 DUS1LQ6P1R4 473 aaKnown RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 COMMD2Q86X83 199 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 Q8N9G6 341 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 ATP6V1C2Q8NEY4 427 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 OR5AR1Q8NGP9 310 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 HUS1BQ8NHY5 278 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 FAM3CQ92520 227 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 RHBDF1Q96CC6 855 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 SLC12A9Q9BXP2 914 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CPEB1Q9BZB8 566 aaKnown RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 HEBP1Q9NRV9 189 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 FAM120CQ9NX05 1096 aaKnown RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 MYO10Q9HD67 2058 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 TTC3P53804 2025 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 MYOCOSA0A1B0GUC4 107 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 I6L893 689 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms