RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 CUL9Q8IWT3 2517 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 IGHV1OR21-1A0A087WYE8 117 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 RHPN2P1A8MT19 583 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 MAGEB17A8MXT2 336 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 YKT6O15498 198 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 TNFSF14O43557 240 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 HCRTR1O43613 425 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 NUDT21O43809 227 aaKnown RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 SH3BP5O60239 455 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 HNRNPCL1O60812 293 aaKnown RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 CTSVO60911 334 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 PEX11AO75192 247 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 STATHP02808 62 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 ZNF806P0C7X5 589 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 PCNAP12004 261 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 GLB1P16278 677 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 MAGP20916 626 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 TGM1P22735 817 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 BCL6P41182 706 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 GFERP55789 205 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 ABATP80404 500 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 SPEM2Q0P670 501 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 DDX39BQ13838 428 aaKnown RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 MED27Q6P2C8 311 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 RNF165Q6ZSG1 346 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 FAM181AQ8N9Y4 354 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 CCDC74AQ96AQ1 378 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 TUBB6Q9BUF5 446 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 CCDC28BQ9BUN5 200 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 EFCAB11Q9BUY7 163 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 STN1Q9H668 368 aaKnown RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 ZNF385DQ9H6B1 395 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 TMEM184CQ9NVA4 438 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 TMEM9Q9P0T7 183 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 POMT2Q9UKY4 750 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 SNX6Q9UNH7 406 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 APOBEC2Q9Y235 224 aaKnown RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 UNC13CQ8NB66 2214 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 OTOGLQ3ZCN5 2332 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 ASCC3Q8N3C0 2202 aaKnown RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 SERTM1A2A2V5 107 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 OR2A25A4D2G3 310 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 C2orf74A8MZ97 194 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 LSM1O15116 133 aaKnown RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 SMNDC1O75940 238 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 KRT6AP02538 564 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 KRT6BP04259 564 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 AMD1P17707 334 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 CD1CP29017 333 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 CMPK1P30085 196 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 CSF2RBP32927 897 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 CAPZBP47756 277 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 KRT6CP48668 564 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 RPS13P62277 151 aaKnown RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 COL9A2Q14055 689 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 RBBP5Q15291 538 aaKnown RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 PROX2Q3B8N5 592 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 C6orf136Q5SQH8 315 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 NXNQ6DKJ4 435 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 FIGLAQ6QHK4 219 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 TMIGD1Q6UXZ0 262 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 RIPOR1Q6ZS17 1223 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 CHSY3Q70JA7 882 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 TMPRSS9Q7Z410 1059 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 OOSP2Q86WS3 158 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 AFAP1L2Q8N4X5 818 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 STON2Q8WXE9 905 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 TUBGCP3Q96CW5 907 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 MACROD1Q9BQ69 325 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 DUSP23Q9BVJ7 150 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 ELOVL6Q9H5J4 265 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 DENND2DQ9H6A0 471 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 DNAAF2Q9NVR5 837 aaKnown RBP11.08□□□□□ -0.64
CTCFL-221ENST00000608903 PILRAQ9UKJ1 303 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 ENTPD2Q9Y5L3 495 aa11.08□□□□□ -0.64
CTCFL-221ENST00000608903 CPED1A4D0V7 1026 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 B2RBV5 119 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 GYG2O15488 501 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 CHEK2O96017 543 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 CTSBP07858 339 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 ST6GAL1P15907 406 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 CYP4F2P78329 520 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 BLMHQ13867 455 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 KIAA0040Q15053 153 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 NR0B2Q15466 257 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 SLC5A12Q1EHB4 618 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 RFTN2Q52LD8 501 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-221ENST00000608903 USP53Q70EK8 1073 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 DGLUCYQ7Z3D6 616 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 ADCK2Q7Z695 626 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 AVL9Q8NBF6 648 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 RBM15BQ8NDT2 890 aaKnown RBP11.07□□□□□ -0.64
CTCFL-221ENST00000608903 CREB3L4Q8TEY5 395 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 ATOH1Q92858 354 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-221ENST00000608903 APIPQ96GX9 242 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 CATSPER2Q96P56 530 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 MAP3K3Q99759 626 aa11.07□□□□□ -0.64
CTCFL-221ENST00000608903 AIF1LQ9BQI0 150 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms