RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 TAC3Q9UHF0 121 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 CSMD2Q7Z408 3487 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 NUP210LQ5VU65 1888 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 NAV3Q8IVL0 2385 aa18.32■□□□□ 0.52
SGMS1-208ENST00000608287 E7ENX8 843 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 PIAS1O75925 651 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 TAP2Q03519 686 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 SP140Q13342 867 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 NAA25Q14CX7 972 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 INAQ16352 499 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 THEMIS2Q5TEJ8 643 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 XKRXQ6PP77 449 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 ZDHHC24Q6UX98 284 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 MRGPRGQ86SM5 289 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 ZC3HC1Q86WB0 502 aaKnown RBP18.31■□□□□ 0.52
SGMS1-208ENST00000608287 CDKL2Q92772 493 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 DLG3Q92796 817 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 SLC6A20Q9NP91 592 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 IFT80Q9P2H3 777 aaPredicted RBP18.31■□□□□ 0.52
SGMS1-208ENST00000608287 PDE10AQ9Y233 779 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 KLK4Q9Y5K2 254 aa18.31■□□□□ 0.52
SGMS1-208ENST00000608287 ABCA2Q9BZC7 2435 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 A0A0J9YVX5 310 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 FAM95CA0A1B0GW59 222 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 ESYT3A0FGR9 886 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 PABPN1LA6NDY0 278 aaKnown RBP18.3■□□□□ 0.52
SGMS1-208ENST00000608287 KIF2AO00139 706 aaPredicted RBP18.3■□□□□ 0.52
SGMS1-208ENST00000608287 SLC16A5O15375 505 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 NRP2O60462 931 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 CTSVO60911 334 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 CCNDBP1O95273 360 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 TUBB4AP04350 444 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 SNRPB2P08579 225 aaKnown RBP18.3■□□□□ 0.52
SGMS1-208ENST00000608287 CD1EP15812 388 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 IMPA1P29218 277 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 DCDP81605 110 aaKnown RBP18.3■□□□□ 0.52
SGMS1-208ENST00000608287 TCTE1Q5JU00 501 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 PRAMEF13Q5VWM6 474 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 ICE2Q659A1 982 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 ZNF385CQ66K41 422 aaPredicted RBP18.3■□□□□ 0.52
SGMS1-208ENST00000608287 C3orf62Q6ZUJ4 267 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 CDH24Q86UP0 819 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 CCDC138Q96M89 665 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 PHACTR1Q9C0D0 580 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 PARVBQ9HBI1 364 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 ZBTB20Q9HC78 741 aaPredicted RBP18.3■□□□□ 0.52
SGMS1-208ENST00000608287 SMYD2Q9NRG4 433 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 PCSK5Q92824 1860 aa18.3■□□□□ 0.52
SGMS1-208ENST00000608287 ANKRD12Q6UB98 2062 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 TCRBV9S1A1TA0A576 114 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 OR2A25A4D2G3 310 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 TSPAN12O95859 305 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 HIST1H2AGP0C0S8 130 aaPredicted RBP18.29■□□□□ 0.52
SGMS1-208ENST00000608287 HIST1H2ADP20671 130 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 ALAS2P22557 587 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 MAGEA4P43358 317 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 ARSFP54793 590 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 CASP6P55212 293 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 VSX2P58304 361 aaPredicted RBP18.29■□□□□ 0.52
SGMS1-208ENST00000608287 PRDX1Q06830 199 aaKnown RBP18.29■□□□□ 0.52
SGMS1-208ENST00000608287 FRMPD2BQ6IN97 320 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 MBOAT1Q6ZNC8 495 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 TTC29Q8NA56 475 aaPredicted RBP18.29■□□□□ 0.52
SGMS1-208ENST00000608287 HIST1H2AHQ96KK5 128 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 HIST1H2AJQ99878 128 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 H2AFJQ9BTM1 129 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 RHOJQ9H4E5 214 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 CCDC177Q9NQR7 707 aaPredicted RBP18.29■□□□□ 0.52
SGMS1-208ENST00000608287 STOX2Q9P2F5 926 aaPredicted RBP18.29■□□□□ 0.52
SGMS1-208ENST00000608287 TXNDC16Q9P2K2 825 aa18.29■□□□□ 0.52
SGMS1-208ENST00000608287 CXorf49A8MYA2 514 aaPredicted RBP18.28■□□□□ 0.52
SGMS1-208ENST00000608287 SRPX2O60687 465 aaPredicted RBP18.28■□□□□ 0.52
SGMS1-208ENST00000608287 GSTA2P09210 222 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 AGAP20933 346 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 GPX6P59796 221 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 GUCY2DQ02846 1103 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 RBPJQ06330 500 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 GRM7Q14831 915 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 SLC9A5Q14940 896 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 PHKG1Q16816 387 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 WASHC2DQ5SRD0 308 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 TTLL10Q6ZVT0 673 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 RNF44Q7L0R7 432 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 PPP1R32Q7Z5V6 425 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 ADCK2Q7Z695 626 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 LRRC56Q8IYG6 542 aaPredicted RBP18.28■□□□□ 0.52
SGMS1-208ENST00000608287 MNS1Q8NEH6 495 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 ALKBH8Q96BT7 664 aaKnown RBP18.28■□□□□ 0.52
SGMS1-208ENST00000608287 C14orf79Q96F83 325 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 VPS39Q96JC1 886 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 ZFYVE21Q9BQ24 234 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 PLCD4Q9BRC7 762 aa18.28■□□□□ 0.52
SGMS1-208ENST00000608287 UTP6Q9NYH9 597 aaKnown RBP18.28■□□□□ 0.52
SGMS1-208ENST00000608287 TRGV8A0A0C4DH27 118 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 IGKV1-8A0A0C4DH67 115 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 PCDH17O14917 1159 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 EIF2S1P05198 315 aaKnown RBP18.27■□□□□ 0.52
SGMS1-208ENST00000608287 ZNF37AP17032 561 aaPredicted RBP18.27■□□□□ 0.52
SGMS1-208ENST00000608287 SLC12A2P55011 1212 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 TAS2R39P59534 338 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms