RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 TCF7P36402 384 aaPredicted RBP3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 OR3A2P47893 321 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 PAX9P55771 341 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 XGP55808 180 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 SNRPD1P62314 119 aaKnown RBP3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 SCN1BQ07699 218 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 NFE2L1Q14494 772 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 TMEM132DQ14C87 1099 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 TWISTNBQ3B726 338 aaPredicted RBP3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 PODNL1Q6PEZ8 512 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 GPR141Q7Z602 305 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 PRUNE1Q86TP1 453 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 CCDC60Q8IWA6 550 aaPredicted RBP3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 GPC2Q8N158 579 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 GBP7Q8N8V2 638 aaPredicted RBP3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 CCDC63Q8NA47 563 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 GPRC5AQ8NFJ5 357 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 ZNRF4Q8WWF5 429 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 WBP2Q969T9 261 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 MAGED4Q96JG8 741 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 ART5Q96L15 291 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 C2orf48Q96LS8 159 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 BTBD9Q96Q07 612 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 DNAI2Q9GZS0 605 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 FAM49AQ9H0Q0 323 aaPredicted RBP3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 C5orf66Q9H5L9 145 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 IARS2Q9NSE4 1012 aaKnown RBP3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 KLHL8Q9P2G9 620 aaPredicted RBP3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 C19orf25Q9UFG5 118 aaPredicted RBP3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 PILRBQ9UKJ0 227 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 ITGA11Q9UKX5 1188 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 CDH7Q9ULB5 785 aa3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 HBS1LQ9Y450 684 aaKnown RBP3.35□□□□□ -1.87
RNU6-88P-201ENST00000606801 FER1L5A0AVI2 2057 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 TRAV18A0A075B6X5 111 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 MEX3AA1L020 520 aaKnown RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 OOEPA6NGQ2 149 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 ECE2O60344 883 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 SAP30O75446 220 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 DUS4LO95620 317 aaKnown RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 MOCS2O96007 188 aaPredicted RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 RLN1P04808 185 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 ZSCAN5DPP0CG00 497 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 MUTP22033 750 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 ELAVL4P26378 380 aaKnown RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 SSTR1P30872 391 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 CETN2P41208 172 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 TNNT3P45378 269 aaPredicted RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 KRT83P78385 493 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 FOLH1Q04609 750 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 IL10RBQ08334 325 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 EFTUD2Q15029 972 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 E2F5Q15329 346 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 TYSND1Q2T9J0 566 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 SPOUT1Q5T280 376 aaKnown RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 OTUD3Q5T2D3 398 aaPredicted RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 ZC2HC1BQ5TFG8 222 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 FAM46CQ5VWP2 391 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 KLHL10Q6JEL2 608 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 FUT10Q6P4F1 479 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 GBP6Q6ZN66 633 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 SLC24A5Q71RS6 500 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 OTOAQ7RTW8 1153 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 PIWIL3Q7Z3Z3 882 aaKnown RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 CATSPERDQ86XM0 798 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 MEX3DQ86XN8 651 aaKnown RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 DZIP1Q86YF9 867 aaKnown RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 ZC3H3Q8IXZ2 948 aaKnown RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 TDHQ8IZJ6 230 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 WDSUB1Q8N9V3 476 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 ATAD1Q8NBU5 361 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 OR2T6Q8NHC8 308 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 FIBINQ8TAL6 211 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 ARHGAP45Q92619 1136 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 NXPE2Q96DL1 559 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 NEDD4LQ96PU5 975 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 NKX3-1Q99801 234 aaPredicted RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 GPATCH1Q9BRR8 931 aaKnown RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 ALKBH7Q9BT30 221 aaPredicted RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 CLEC7AQ9BXN2 247 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 PANK4Q9NVE7 773 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 BARHL2Q9NY43 387 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 SEPT10Q9P0V9 454 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 IL36AQ9UHA7 158 aa3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 ELF5Q9UKW6 265 aaPredicted RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 RUVBL2Q9Y230 463 aaKnown RBP3.34□□□□□ -1.87
RNU6-88P-201ENST00000606801 A0A0B4J203 849 aa3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 YDJCA8MPS7 323 aa3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 NPIPA3F8WFD2 350 aa3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 H0YIG0 161 aa3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 RTCAO00442 366 aaKnown RBP3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 MLNRO43193 412 aa3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 ACSL4O60488 711 aa3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 SLU7O95391 586 aaKnown RBP3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 C9P02748 559 aa3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 RBMS1P29558 406 aaKnown RBP3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 SLC6A12P48065 614 aa3.33□□□□□ -1.88
RNU6-88P-201ENST00000606801 DRP2Q13474 957 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms