RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 MRFAP1Q9Y605 127 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 HRNRQ86YZ3 2850 aaPredicted RBP11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 KIAA1324LA8MWY0 1029 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TXNDC9O14530 226 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 HS6ST1O60243 411 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PRMT3O60678 531 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 EZRP15311 586 aaKnown RBP11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CTNNA2P26232 953 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TPP2P29144 1249 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 RPA3P35244 121 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CCNFP41002 786 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 AGTR2P50052 363 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ITGA8P53708 1063 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 DLX5P56178 289 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 UBASH3AP57075 661 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 NUP107P57740 925 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 FAM53BQ14153 422 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SEMA3AQ14563 771 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 NDUFA9Q16795 377 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SUSD1Q6UWL2 747 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ZNF534Q76KX8 674 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PRSS41Q7RTY9 318 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ADCK2Q7Z695 626 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PLD3Q8IV08 490 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 POGLUT1Q8NBL1 392 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 WFDC11Q8NEX6 87 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 KRT35Q92764 455 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TMEM125Q96AQ2 219 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 RBCK1Q9BYM8 510 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CDCP1Q9H5V8 836 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TAC3Q9UHF0 121 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PCYOX1Q9UHG3 505 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ALG6Q9Y672 507 aa11.06□□□□□ -0.64
PDLIM1P1-201ENST00000604187 H0YIG0 161 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 HAT1O14929 419 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PJA2O43164 708 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PDE9AO76083 593 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 METTL18O95568 372 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PKMP14618 531 aaKnown RBP11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TFEBP19484 476 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ADSLP30566 484 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CYB561P49447 251 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ACTN3Q08043 901 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 USP10Q14694 798 aaKnown RBP11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ABRAXAS2Q15018 415 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 IQCB1Q15051 598 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PARP6Q2NL67 630 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 EMC4Q5J8M3 183 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PTRHD1Q6GMV3 140 aaKnown RBP11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ZNF425Q6IV72 752 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ARHGAP11AQ6P4F7 1023 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CLEC9AQ6UXN8 241 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CLEC17AQ6ZS10 378 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ACAD11Q709F0 780 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 LDB1Q86U70 411 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 RPS19BP1Q86WX3 136 aaKnown RBP11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ZNF227Q86WZ6 799 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PRIMA1Q86XR5 153 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 KIF2BQ8N4N8 673 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MYRIPQ8NFW9 859 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR5M3Q8NGP4 307 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR6P1Q8NGX9 317 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR4L1Q8NH43 312 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR51Q1Q8NH59 317 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SMPDL3AQ92484 453 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TSLPQ969D9 159 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 C18orf12Q96KH6 178 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 FOPNLQ96NB1 174 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 LPAR4Q99677 370 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 EDARQ9UNE0 448 aa11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 KLF13Q9Y2Y9 288 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SGK494L7N484 410 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PRMT5O14744 637 aaPredicted RBP11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CDC123O75794 336 aaPredicted RBP11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 NSA2O95478 260 aaKnown RBP11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 IL1RNP18510 177 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 NR0B1P51843 470 aaKnown RBP11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SLC26A5P58743 744 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SNTB1Q13884 538 aaKnown RBP11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TCEAL1Q15170 157 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 NSDHLQ15738 373 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 FASTKD1Q53R41 847 aaKnown RBP11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ICE2Q659A1 982 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ARSKQ6UWY0 536 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OTOAQ7RTW8 1153 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SULF2Q8IWU5 870 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 FAM71DQ8N9W8 422 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR52K1Q8NGK4 314 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR10Q1Q8NGQ4 319 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MAGEC3Q8TD91 643 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MCOLN3Q8TDD5 553 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MBD6Q96DN6 1003 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CCDC42Q96M95 316 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 DNAJC7Q99615 494 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SLC6A16Q9GZN6 736 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 RASSF1Q9NS23 344 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 UTP6Q9NYH9 597 aaKnown RBP11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms