RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 IRF8Q02556 426 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 RGS1Q08116 209 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CYP4F3Q08477 520 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 GTF2H2Q13888 395 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 FAM53BQ14153 422 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 NDUFA9Q16795 377 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 MUM1Q2TAK8 710 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ZNF678Q5SXM1 525 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 AGBL2Q5U5Z8 902 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 LIPMQ5VYY2 423 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 GTF2H2CQ6P1K8 395 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 C6orf15Q6UXA7 325 aaPredicted RBP9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 TMIGD1Q6UXZ0 262 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 PROSER1Q86XN7 944 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 LAS2Q8IYD9 372 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 KIRREL3Q8IZU9 778 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 TEX9Q8N6V9 391 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CSNK1A1LQ8N752 337 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 GOLGA6L1Q8N7Z2 621 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 L3MBTL4Q8NA19 623 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 MFSD9Q8NBP5 474 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 NT5CQ8TCD5 201 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ZNF483Q8TF39 744 aaPredicted RBP9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ZCCHC14Q8WYQ9 949 aaKnown RBP9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 FKBP10Q96AY3 582 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 TM4SF19Q96DZ7 209 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 SLC7A5P2Q9GIP4 190 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 KLHL25Q9H0H3 589 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 RHBGQ9H310 441 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ACTR8Q9H981 624 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CLK4Q9HAZ1 481 aaKnown RBP9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 APMAPQ9HDC9 416 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 TXLNGQ9NUQ3 528 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ABCF3Q9NUQ8 709 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 OXSMQ9NWU1 459 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 GEMIN8Q9NWZ8 242 aaKnown RBP9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 PSD3Q9NYI0 1048 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CDC14AQ9UNH5 594 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 SH2B3Q9UQQ2 575 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 SSUH2Q9Y2M2 353 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 PCDHGA11Q9Y5H2 935 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 SLC22A7Q9Y694 548 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 APC2O95996 2303 aa9.06□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ANKRD11Q6UB99 2663 aaPredicted RBP9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 A0A087WV48 116 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 A0A088AWK7 358 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 A0A0J9YVX5 310 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 PMS2P1A4D2B8 440 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 H0YGG7 62 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 H0YIV9 168 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 BIRC5O15392 142 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ZNF749O43361 778 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 DLX3O60479 287 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CLEC3AO75596 197 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 KIAA0754O94854 1291 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ONECUT2O95948 504 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 RECKO95980 971 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 SERPINA6P08185 405 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CYC1P08574 325 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CPA3P15088 417 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 EPORP19235 508 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ZNF10P21506 573 aaPredicted RBP9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 AGXTP21549 392 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 STAT5AP42229 794 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 PIK3CBP42338 1070 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 TSFMP43897 325 aaKnown RBP9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 AGTR2P50052 363 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 PKNOX1P55347 436 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 VSX2P58304 361 aaPredicted RBP9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ARF3P61204 181 aaPredicted RBP9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 YBX1P67809 324 aaKnown RBP9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 GALNT1Q10472 559 aaPredicted RBP9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 LCP2Q13094 533 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CHIT1Q13231 466 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 DOC2AQ14183 400 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 SLBPQ14493 270 aaKnown RBP eCLIP9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 HERC3Q15034 1050 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 DEFB110Q30KQ9 67 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CRTC2Q53ET0 693 aaPredicted RBP9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 XKR6Q5GH73 641 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 WASHC2DQ5SRD0 308 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CATSPEREQ5SY80 951 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 FRMPD2BQ6IN97 320 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 MED27Q6P2C8 311 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 FBXO42Q6P3S6 717 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 GOLGA7Q7Z5G4 137 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 VN1R4Q7Z5H5 301 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ASPGQ86U10 573 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 EXOC3L1Q86VI1 746 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 MARCH9Q86YJ5 346 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 FAM20CQ8IXL6 584 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 DSELQ8IZU8 1212 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 ARHGEF39Q8N4T4 335 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CCDC63Q8NA47 563 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 TCP10LQ8TDR4 215 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 KCNE4Q8WWG9 221 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 KIAA1143Q96AT1 154 aaPredicted RBP9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 TLCD1Q96CP7 247 aa9.05□□□□□ -0.96
SQSTM1P1-201ENST00000603451 CLIP3Q96DZ5 547 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms