RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GAS2O43903 313 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 SNAP91O60641 907 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF623O75123 536 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 BCAS1O75363 584 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CSDE1O75534 798 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 WISP1O95388 367 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 BCL10O95999 233 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MST1P26927 711 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CHRNA5P30532 468 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FDFT1P37268 417 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 SPIBQ01892 262 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 IRF8Q02556 426 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 DBPQ10586 325 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 BST1Q10588 318 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 GAMTQ14353 236 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MFSD13AQ14CX5 517 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 NKG7Q16617 165 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ELOA3BQ3SY89 546 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF618Q5T7W0 954 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ATF7IP2Q5U623 682 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 LRRC38Q5VT99 294 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PRAMEF13Q5VWM6 474 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 LRRC66Q68CR7 880 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CLEC9AQ6UXN8 241 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 EID3Q8N140 333 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ZBTB2Q8N680 514 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ARFGAP1Q8N6T3 406 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ELOA3Q8NG57 546 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 OR4D10Q8NGI6 311 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 GRAPLQ8TC17 118 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PIGBQ92521 554 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 IRF7Q92985 503 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 SPSB4Q96A44 273 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 TESCQ96BS2 214 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 EID2BQ96D98 161 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CCDC120Q96HB5 630 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 OXNAD1Q96HP4 312 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PPP1R2P1Q96PQ5 205 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 KIFC1Q9BW19 673 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC2A11Q9BYW1 496 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PPA2Q9H2U2 334 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 IFT46Q9NQC8 304 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 TLR9Q9NR96 1032 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 C20orf96Q9NUD7 363 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PTTG3PQ9NZH4 202 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MAT2BQ9NZL9 334 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ONECUT1Q9UBC0 465 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 RUVBL2Q9Y230 463 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PLEKHM1Q9Y4G2 1056 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 A0A087WZY1 265 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM90A20PA6NIJ5 464 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 C2orf74A8MZ97 194 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF487B1APH4 448 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ERVV-1B6SEH8 477 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 J3KTA2 159 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CES2O00748 559 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MEIS2O14770 477 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 TSPAN4O14817 238 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CALUO43852 315 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FKTNO75072 461 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 NADKO95544 446 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 AMY2AP04746 511 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 KRT19P08727 400 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 HBQ1P09105 142 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CALCBP10092 127 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PTPRAP18433 802 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 AMY2BP19961 511 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CASP1P29466 404 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 SERPINB1P30740 379 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CXCR5P32302 372 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CYLC1P35663 651 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 SOX18P35713 384 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CABP4P57796 275 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MYBPC1Q00872 1141 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 STX5Q13190 355 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 RIN1Q13671 783 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 VEZF1Q14119 521 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF846Q147U1 533 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM98BQ52LJ0 330 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MPPE1Q53F39 396 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF667Q5HYK9 610 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PDSS1Q5T2R2 415 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC9A4Q6AI14 798 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 UGT3A1Q6NUS8 523 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 INO80CQ6PI98 192 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 WDR59Q6PJI9 974 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PLEKHG7Q6ZR37 379 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 RBPMS2Q6ZRY4 209 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 GPRIN3Q6ZVF9 776 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 TRMT11Q7Z4G4 463 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FRMD5Q7Z6J6 570 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 RTN4RL2Q86UN3 420 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PRSS58Q8IYP2 241 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 DCP1BQ8IZD4 617 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ZDHHC14Q8IZN3 488 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CADM2Q8N3J6 435 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 AGBL3Q8NEM8 1001 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 TCTN2Q96GX1 697 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms