RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PLD3Q8IV08 490 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 SLC22A9Q8IVM8 553 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 SRRM1Q8IYB3 904 aaKnown RBP13.25□□□□□ -0.29
RNF40-212ENST00000602784 DSELQ8IZU8 1212 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 C4orf33Q8N1A6 199 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 KRT78Q8N1N4 520 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 TEX9Q8N6V9 391 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 CSNK1A1LQ8N752 337 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 BANPQ8N9N5 519 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 CAMKVQ8NCB2 501 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 ZNF740Q8NDX6 193 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 TTLQ8NG68 377 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 CCDC126Q96EE4 140 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 PHF21BQ96EK2 531 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 PTCD3Q96EY7 689 aaKnown RBP13.25□□□□□ -0.29
RNF40-212ENST00000602784 APOPT1Q96IL0 206 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 SMC6Q96SB8 1091 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 NLNQ9BYT8 704 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 SLC7A5P2Q9GIP4 190 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 SYNPO2LQ9H987 977 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 GEMIN8Q9NWZ8 242 aaKnown RBP13.25□□□□□ -0.29
RNF40-212ENST00000602784 ANGPTL3Q9Y5C1 460 aa13.25□□□□□ -0.29
RNF40-212ENST00000602784 FEZF1A0PJY2 475 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 DSCR3O14972 297 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 KLK10O43240 276 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 OR1F1O43749 312 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 DLX3O60479 287 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 PLIN3O60664 434 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 UGDHO60701 494 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 PRAMEF4O60810 478 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 SIX3O95343 332 aaPredicted RBP13.24□□□□□ -0.29
RNF40-212ENST00000602784 EIF2S1P05198 315 aaKnown RBP13.24□□□□□ -0.29
RNF40-212ENST00000602784 H2AFXP16104 143 aaPredicted RBP13.24□□□□□ -0.29
RNF40-212ENST00000602784 EEF1DP29692 281 aaKnown RBP13.24□□□□□ -0.29
RNF40-212ENST00000602784 PRKAA2P54646 552 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 HERVK_113P63132 956 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 MEF2AQ02078 507 aaPredicted RBP13.24□□□□□ -0.29
RNF40-212ENST00000602784 IRF8Q02556 426 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 GPS2Q13227 327 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 CHIT1Q13231 466 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 GTF2H2Q13888 395 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 FAM53BQ14153 422 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 DOC2AQ14183 400 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 CASP8Q14790 479 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 TGIF1Q15583 401 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 MUM1Q2TAK8 710 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 XKR6Q5GH73 641 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 PAGE2BQ5JRK9 111 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 PRAMEF9Q5VWM5 478 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 ZNF385CQ66K41 422 aaPredicted RBP13.24□□□□□ -0.29
RNF40-212ENST00000602784 GTF2H2CQ6P1K8 395 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 TMIGD1Q6UXZ0 262 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 ZYG11AQ6WRX3 759 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 SPACA3Q8IXA5 215 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 ARHGEF39Q8N4T4 335 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 IL22RA1Q8N6P7 574 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 TRPV3Q8NET8 790 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 UBE2E3Q969T4 207 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 MVB12AQ96EY5 273 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 GBP5Q96PP8 586 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 EFHD1Q9BUP0 239 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 ERVK-6Q9BXR3 956 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 LHX9Q9NQ69 397 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 STARD5Q9NSY2 213 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 CUTCQ9NTM9 273 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 TXLNGQ9NUQ3 528 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 ZFP69BQ9UJL9 534 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 PCTPQ9UKL6 214 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 ZMIZ1Q9ULJ6 1067 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 RUVBL1Q9Y265 456 aaKnown RBP13.24□□□□□ -0.29
RNF40-212ENST00000602784 PLLPQ9Y342 182 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 ACTL7BQ9Y614 415 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 EPG5Q9HCE0 2579 aa13.24□□□□□ -0.29
RNF40-212ENST00000602784 USP24Q9UPU5 2620 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 TEX51A0A1B0GUA7 166 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 A0A1B0GX78 115 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 LRRC14BA6NHZ5 514 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 C21orf140B9A014 251 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 G3V2L1 256 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 RPS17P08708 135 aaKnown RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 SLC35G6P0C7Q6 338 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 MYL2P10916 166 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 IMPDH1P20839 514 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 AGXTP21549 392 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 VARSP26640 1264 aaKnown RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 HNF4AP41235 474 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 NAA20P61599 178 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 DCDP81605 110 aaKnown RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 SLBPQ14493 270 aaKnown RBP eCLIP13.23□□□□□ -0.29
RNF40-212ENST00000602784 HIST2H2ACQ16777 129 aaPredicted RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 LIPJQ5W064 366 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 HIST2H2AA3Q6FI13 130 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 PRMT9Q6P2P2 845 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 GOLGA7Q7Z5G4 137 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 ASPGQ86U10 573 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 NT5CQ8TCD5 201 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 ZNF483Q8TF39 744 aaPredicted RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 SLC13A3Q8WWT9 602 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 KIAA1143Q96AT1 154 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms