RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-206	ENST00000601697	OR7A2P	Q8NGA2	310 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	WDR20	Q8TBZ3	569 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	S100Z	Q8WXG8	99 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	TMEM159	Q96B96	161 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	REPS1	Q96D71	796 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	CXorf40B	Q96DE9	158 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	HSH2D	Q96JZ2	352 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	FOPNL	Q96NB1	174 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	DUSP26	Q9BV47	211 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	WDR12	Q9GZL7	423 aa	Known RBP	13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	ATG10	Q9H0Y0	220 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	PRO3102	Q9H379	93 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	PRM3	Q9NNZ6	103 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	KRT84	Q9NSB2	600 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	CD84	Q9UIB8	345 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	SLCO3A1	Q9UIG8	710 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	TMPRSS11E	Q9UL52	423 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	HCFC2	Q9Y5Z7	792 aa		13.62	□□□□□ -0.23
PSMC4-206	ENST00000601697	CPSF4	O95639	269 aa	Known RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	XPA	P23025	273 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	BMX	P51813	675 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	IL1RL1	Q01638	556 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	PPP1R8	Q12972	351 aa	Known RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	NR1D2	Q14995	579 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	TEAD4	Q15561	434 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	TBC1D25	Q3MII6	688 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	C10orf62	Q5T681	223 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	CPTP	Q5TA50	214 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	LAIR2	Q6ISS4	152 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	GALNT18	Q6P9A2	607 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	RFLNA	Q6ZTI6	216 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	CAMKMT	Q7Z624	323 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	GALNT5	Q7Z7M9	940 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	RAVER1	Q8IY67	606 aa	Known RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	CELF5	Q8N6W0	485 aa	Known RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	TTC29	Q8NA56	475 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	CHST14	Q8NCH0	376 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	CDC26	Q8NHZ8	85 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	TANK	Q92844	425 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	FKBP10	Q96AY3	582 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	EGLN2	Q96KS0	407 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	SAMD11	Q96NU1	681 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	EPYC	Q99645	322 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	FAM83C	Q9BQN1	747 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	HEPH	Q9BQS7	1158 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	HMG20A	Q9NP66	347 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	NECTIN3	Q9NQS3	549 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	DNAAF2	Q9NVR5	837 aa	Known RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	VNN3	Q9NY84	501 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	PDP1	Q9P0J1	537 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	VPS4A	Q9UN37	437 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	ABCG2	Q9UNQ0	655 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	UPK3BL1	B0FP48	263 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	UPK3BL2	E5RIL1	263 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	ATG13	O75143	517 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	BCAS1	O75363	584 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	GABARAP	O95166	117 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	C9	P02748	559 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	SRPRA	P08240	638 aa	Known RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	OCM2	P0CE71	109 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	OCM	P0CE72	109 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	PTX3	P26022	381 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	HTR1B	P28222	390 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	BMP8B	P34820	402 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	NNMT	P40261	264 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	DAP	P51397	102 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	CCR3	P51677	355 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	WNT3	P56703	355 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	SLC14A1	Q13336	389 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	GPM6B	Q13491	265 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	DOC2A	Q14183	400 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	RGS21	Q2M5E4	152 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	SLC44A4	Q53GD3	710 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	KIAA1614	Q5VZ46	1190 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	ANKRD34A	Q69YU3	496 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	AGTRAP	Q6RW13	159 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	SERPINA13P	Q6UXR4	307 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	GPR155	Q7Z3F1	870 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	SYNPO	Q8N3V7	929 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	NAT16	Q8N8M0	369 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	ATG16L2	Q8NAA4	619 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	OR2A12	Q8NGT7	310 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	CNIH3	Q8TBE1	160 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	FAR1	Q8WVX9	515 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	ZNF347	Q96SE7	839 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	DUSP21	Q9H596	190 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	EPS8L2	Q9H6S3	715 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	SGK2	Q9HBY8	427 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	PCDH12	Q9NPG4	1184 aa		13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC4-206	ENST00000601697	TSPAN11	A1L157	253 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	MGAT4D	A6NG13	374 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	ARHGEF33	A8MVX0	844 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697		E7EQ34	232 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	hCG_2039718	K7EN88	272 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms