RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 PCNAP12004 261 aa19.58■□□□□ 0.73
PNKP-215ENST00000600910 SCTRP47872 440 aa19.58■□□□□ 0.73
PNKP-215ENST00000600910 DEFB110Q30KQ9 67 aa19.58■□□□□ 0.73
PNKP-215ENST00000600910 MTERF4Q7Z6M4 381 aaKnown RBP19.58■□□□□ 0.73
PNKP-215ENST00000600910 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.58■□□□□ 0.73
PNKP-215ENST00000600910 D2HGDHQ8N465 521 aa19.58■□□□□ 0.73
PNKP-215ENST00000600910 DNAJC22Q8N4W6 341 aa19.58■□□□□ 0.73
PNKP-215ENST00000600910 WDR20Q8TBZ3 569 aa19.58■□□□□ 0.73
PNKP-215ENST00000600910 MTFMTQ96DP5 389 aaKnown RBP19.58■□□□□ 0.73
PNKP-215ENST00000600910 ELOVL6Q9H5J4 265 aa19.58■□□□□ 0.73
PNKP-215ENST00000600910 MARCOQ9UEW3 520 aaPredicted RBP19.58■□□□□ 0.73
PNKP-215ENST00000600910 SNX6Q9UNH7 406 aa19.58■□□□□ 0.73
PNKP-215ENST00000600910 PCDHGA4Q9Y5G9 962 aa19.58■□□□□ 0.73
PNKP-215ENST00000600910 KCNK5O95279 499 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 VIMP08670 466 aaKnown RBP19.58■□□□□ 0.72
PNKP-215ENST00000600910 KITP10721 976 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 NEK2P51955 445 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 GNGT1P63211 74 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 ZC3H12BQ5HYM0 836 aaKnown RBP19.58■□□□□ 0.72
PNKP-215ENST00000600910 HES3Q5TGS1 186 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 FRG2Q64ET8 278 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 FRMPD2BQ6IN97 320 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 ALYREFQ86V81 257 aaKnown RBP19.58■□□□□ 0.72
PNKP-215ENST00000600910 MFSD9Q8NBP5 474 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 REPS1Q96D71 796 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 FAM122AQ96E09 287 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 FRG2BQ96QU4 278 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 OR2A5Q96R48 311 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 RTKNQ9BST9 563 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 FARSBQ9NSD9 589 aaKnown RBP19.58■□□□□ 0.72
PNKP-215ENST00000600910 DNAJC15Q9Y5T4 150 aa19.58■□□□□ 0.72
PNKP-215ENST00000600910 MANBAO00462 879 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 EDF1O60869 148 aaKnown RBP19.57■□□□□ 0.72
PNKP-215ENST00000600910 MT-CO3P00414 261 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 KRT6AP02538 564 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 KRT6BP04259 564 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 SDHBP21912 280 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 CCKBRP32239 447 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 LSP1P33241 339 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 GABRA4P48169 554 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 KRT6CP48668 564 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 HTR6P50406 440 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 CYP4F2P78329 520 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 IFT88Q13099 833 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 DDX39BQ13838 428 aaKnown RBP19.57■□□□□ 0.72
PNKP-215ENST00000600910 C16orf72Q14CZ0 275 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 UGT3A2Q3SY77 523 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 SGO1Q5FBB7 561 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 PIWIL2Q8TC59 973 aaKnown RBP19.57■□□□□ 0.72
PNKP-215ENST00000600910 HBEGFQ99075 208 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 ZFP69BQ9UJL9 534 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 ADAMTS20P59510 1910 aa19.57■□□□□ 0.72
PNKP-215ENST00000600910 LOC105369274A0A096LPK9 316 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 LOC102723532A0A0G2JNH3 316 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 ANKDD1BA6NHY2 528 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 ULK1O75385 1050 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 CHEK2O96017 543 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 PDYNP01213 254 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 FOLR1P15328 257 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 AHRP35869 848 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 ISXQ2M1V0 245 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 TMTC4Q5T4D3 741 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 VN1R5Q7Z5H4 357 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 MCATQ8IVS2 390 aaKnown RBP19.56■□□□□ 0.72
PNKP-215ENST00000600910 KIRREL3Q8IZU9 778 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 OR4N4Q8N0Y3 316 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 RNF175Q8N4F7 328 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 TTLQ8NG68 377 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 HUS1BQ8NHY5 278 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 TWIST2Q8WVJ9 160 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 SELENOMQ8WWX9 145 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 THAP11Q96EK4 314 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 ZNF317Q96PQ6 595 aaPredicted RBP19.56■□□□□ 0.72
PNKP-215ENST00000600910 MTERF1Q99551 399 aaKnown RBP19.56■□□□□ 0.72
PNKP-215ENST00000600910 RHBGQ9H310 441 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 PRM3Q9NNZ6 103 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 ADAM21Q9UKJ8 722 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 TSC22D4Q9Y3Q8 395 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 AP1M2Q9Y6Q5 423 aa19.56■□□□□ 0.72
PNKP-215ENST00000600910 MDC1Q14676 2089 aaKnown RBP19.56■□□□□ 0.72
PNKP-215ENST00000600910 CSO75390 466 aaKnown RBP19.55■□□□□ 0.72
PNKP-215ENST00000600910 STATHP02808 62 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 CSTF2P33240 577 aaKnown RBP eCLIP19.55■□□□□ 0.72
PNKP-215ENST00000600910 ABRAXAS2Q15018 415 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 GPR19Q15760 415 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 SCIMPQ6UWF3 145 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 VN1R4Q7Z5H5 301 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 LRRC34Q8IZ02 419 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 CHCHD4Q8N4Q1 142 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 AFAP1L2Q8N4X5 818 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 N4BP2L2Q92802 583 aaPredicted RBP19.55■□□□□ 0.72
PNKP-215ENST00000600910 USP7Q93009 1102 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 RERGQ96A58 199 aaPredicted RBP19.55■□□□□ 0.72
PNKP-215ENST00000600910 DEPDC7Q96QD5 511 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 FGFR1OP2Q9NVK5 253 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 PLCL2Q9UPR0 1127 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 CLCA2Q9UQC9 943 aa19.55■□□□□ 0.72
PNKP-215ENST00000600910 H0YGG7 62 aa19.54■□□□□ 0.72
PNKP-215ENST00000600910 SKAP2O75563 359 aaPredicted RBP19.54■□□□□ 0.72
PNKP-215ENST00000600910 SERPIND1P05546 499 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms