RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 RIC8BQ9NVN3 520 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 NOVA2Q9UNW9 492 aaKnown RBP14.99□□□□□ -0.01
VRK3-221ENST00000600284 MDC1Q14676 2089 aaKnown RBP14.99□□□□□ -0.01
VRK3-221ENST00000600284 DOCK10Q96BY6 2186 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 NDC80O14777 642 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 BMP10O95393 424 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 ENO2P09104 434 aaPredicted RBP14.98□□□□□ -0.01
VRK3-221ENST00000600284 PRR35P0CG20 571 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 PAFAH1B1P43034 410 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 ILF2Q12905 390 aaKnown RBP14.98□□□□□ -0.01
VRK3-221ENST00000600284 CBLBQ13191 982 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 ZNF169Q14929 603 aaPredicted RBP14.98□□□□□ -0.01
VRK3-221ENST00000600284 NR6A1Q15406 480 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 PHKG1Q16816 387 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 TMEM214Q6NUQ4 689 aaKnown RBP14.98□□□□□ -0.01
VRK3-221ENST00000600284 RPUSD3Q6P087 351 aaKnown RBP14.98□□□□□ -0.01
VRK3-221ENST00000600284 ZC3H7AQ8IWR0 971 aaKnown RBP14.98□□□□□ -0.01
VRK3-221ENST00000600284 GPATCH11Q8N954 259 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 ABHD11Q8NFV4 315 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 OR56A3Q8NH54 315 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 PRR7Q8TB68 274 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 SNF8Q96H20 258 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 CAPZA3Q96KX2 299 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 MESP1Q9BRJ9 268 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 ZNF700Q9H0M5 742 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 ATG10Q9H0Y0 220 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 ARL15Q9NXU5 204 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 MKL2Q9ULH7 1088 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 CHMP2BQ9UQN3 213 aa14.98□□□□□ -0.01
VRK3-221ENST00000600284 USP9XQ93008 2570 aaPredicted RBP14.98□□□□□ -0.01
VRK3-221ENST00000600284 USP27XA6NNY8 438 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 FFAR3O14843 346 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 GPR42O15529 346 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 SEMA7AO75326 666 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 KLHL18O94889 574 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 SEC31AO94979 1220 aaKnown RBP14.97□□□□□ -0.01
VRK3-221ENST00000600284 SOX11P35716 441 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 BCL6P41182 706 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 ITGA8P53708 1063 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 SYT16Q17RD7 645 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 MBOAT1Q6ZNC8 495 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 ASPGQ86U10 573 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 MFSD9Q8NBP5 474 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 ST6GALNAC3Q8NDV1 305 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 OR4K1Q8NGD4 311 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 OR9A4Q8NGU2 314 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 SLC13A3Q8WWT9 602 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 METTL21AQ8WXB1 218 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 ANKRD7Q92527 254 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 PSMF1Q92530 271 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 HAS2Q92819 552 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 CFAP36Q96G28 342 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 WDR83Q9BRX9 315 aaKnown RBP14.97□□□□□ -0.01
VRK3-221ENST00000600284 TUBB6Q9BUF5 446 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 MRPS2Q9Y399 296 aaKnown RBP14.97□□□□□ -0.01
VRK3-221ENST00000600284 CSAG2Q9Y5P2 127 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 SLC22A7Q9Y694 548 aa14.97□□□□□ -0.01
VRK3-221ENST00000600284 USP9YO00507 2555 aaPredicted RBP14.96□□□□□ -0.01
VRK3-221ENST00000600284 PRRC2CQ9Y520 2896 aaKnown RBP14.96□□□□□ -0.01
VRK3-221ENST00000600284 DYTNA2CJ06 578 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 ANKUB1A6NFN9 424 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 TTI1O43156 1089 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 LCMT2O60294 686 aaKnown RBP14.96□□□□□ -0.01
VRK3-221ENST00000600284 WFS1O76024 890 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 SLC35G6P0C7Q6 338 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 C8orf89P0DMQ9 161 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 CDH1P12830 882 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 IL10P22301 178 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 CCR8P51685 355 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 MAT1AQ00266 395 aaKnown RBP14.96□□□□□ -0.01
VRK3-221ENST00000600284 MGAT5Q09328 741 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 ELOAQ14241 798 aaKnown RBP14.96□□□□□ -0.01
VRK3-221ENST00000600284 HP1BP3Q5SSJ5 553 aaPredicted RBP14.96□□□□□ -0.01
VRK3-221ENST00000600284 TRMT10BQ6PF06 316 aaKnown RBP14.96□□□□□ -0.01
VRK3-221ENST00000600284 LINC00696Q6ZRV3 163 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 STRA8Q7Z7C7 330 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 SLC26A11Q86WA9 606 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 TBC1D19Q8N5T2 526 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 OR51Q1Q8NH59 317 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 ALKBH8Q96BT7 664 aaKnown RBP14.96□□□□□ -0.01
VRK3-221ENST00000600284 FBXL8Q96CD0 374 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 PDLIM2Q96JY6 352 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 CNDP1Q96KN2 507 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 IMMP1LQ96LU5 166 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 PWWP2AQ96N64 755 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 CYTH2Q99418 400 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 VN1R1Q9GZP7 353 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 ANKHQ9HCJ1 492 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 MOCS1Q9NZB8 636 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 ZFATQ9P243 1243 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 C19orf25Q9UFG5 118 aaPredicted RBP14.96□□□□□ -0.01
VRK3-221ENST00000600284 SH2B3Q9UQQ2 575 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 NTNG1Q9Y2I2 539 aa14.96□□□□□ -0.01
VRK3-221ENST00000600284 FEZF1A0PJY2 475 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 WIPF3A6NGB9 483 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 EFCAB8A8MWE9 144 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 E7ESA3 106 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 TP73O15350 636 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 EEF1A2Q05639 463 aaKnown RBP14.95□□□□□ -0.02
VRK3-221ENST00000600284 CDC16Q13042 620 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms