RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 WDR20Q8TBZ3 569 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 ZNF75CPQ92670 426 aaPredicted RBP12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 UBE2E3Q969T4 207 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 ZNF501Q96CX3 271 aaPredicted RBP12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 TM4SF19Q96DZ7 209 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 SEC16BQ96JE7 1060 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 SORT1Q99523 831 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 AKAP7Q9P0M2 348 aaPredicted RBP12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 WASF3Q9UPY6 502 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 AP1M2Q9Y6Q5 423 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 FAM149AA5PLN7 773 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 EFCAB7A8K855 629 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 OR1F1O43749 312 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 HYAL3O43820 417 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 LYPLA1O75608 230 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 SNUPNO95149 360 aaKnown RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 TBX6O95947 436 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 CAPN1P07384 714 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 CTSBP07858 339 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 FGF5P12034 268 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 NEFHP12036 1026 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 HGFP14210 728 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 ID4P47928 161 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 SLC1A6P48664 564 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 FOXA1P55317 472 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 MC2RQ01718 297 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 OCRLQ01968 901 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 CYP4F3Q08477 520 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 TUBB3Q13509 450 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 ZRSR2Q15696 482 aaKnown RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 GPR19Q15760 415 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 CPSF6Q16630 551 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 HIST2H2ACQ16777 129 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 C10orf62Q5T681 223 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 FAM219BQ5XKK7 198 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 ATG16L1Q676U5 607 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 HIST2H2AA3Q6FI13 130 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 ADNP2Q6IQ32 1131 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 RAB11FIP2Q7L804 512 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 MARCH9Q86YJ5 346 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 MYLK4Q86YV6 388 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 TBC1D19Q8N5T2 526 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 CDYL2Q8N8U2 506 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 TTLQ8NG68 377 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 OR1L3Q8NH93 324 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 WDR36Q8NI36 951 aaKnown RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 CREB3L4Q8TEY5 395 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 MAGEB18Q96M61 343 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 KCNA7Q96RP8 456 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 EML4Q9HC35 981 aaKnown RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 FBXO8Q9NRD0 319 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 FGF21Q9NSA1 209 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 THAP1Q9NVV9 213 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 ZFP69BQ9UJL9 534 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 PCDHGA11Q9Y5H2 935 aa12.09□□□□□ -0.47
CHMP2A-206ENST00000600118 PMS2P1A4D2B8 440 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 FITM1A5D6W6 292 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 PLD2O14939 933 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 P2RX6O15547 441 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 CLEC3AO75596 197 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 HSPA4LO95757 839 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 SERPINB1P30740 379 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 ARL1P40616 181 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 ETV5P41161 510 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 PIK3CBP42338 1070 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 GCGRP47871 477 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 PWP1Q13610 501 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 IL11RAQ14626 422 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 RBBP5Q15291 538 aaKnown RBP12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 PRTGQ2VWP7 1150 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 UGT3A2Q3SY77 523 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 TCHHL1Q5QJ38 904 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 KANK2Q63ZY3 851 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 FRG2Q64ET8 278 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 ASPGQ86U10 573 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 BPHLQ86WA6 291 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 ARHGEF39Q8N4T4 335 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 OR8K5Q8NH50 307 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 METTL6Q8TCB7 284 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 NT5CQ8TCD5 201 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 ZNF473Q8WTR7 871 aaKnown RBP12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 DYDC1Q8WWB3 177 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 USP7Q93009 1102 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 FRG2BQ96QU4 278 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 OR6C1Q96RD1 312 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 SHCBP1LQ9BZQ2 653 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 CCDC134Q9H6E4 229 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 ZDHHC2Q9UIJ5 367 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 PPT2Q9UMR5 302 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 TRAF6Q9Y4K3 522 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 PCDHGA8Q9Y5G5 932 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 SNRNP200O75643 2136 aaKnown RBP12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 SPEGQ15772 3267 aa12.08□□□□□ -0.48
CHMP2A-206ENST00000600118 TMEM233B4DJY2 109 aa12.07□□□□□ -0.48
CHMP2A-206ENST00000600118 TMEM150CB9EJG8 249 aa12.07□□□□□ -0.48
CHMP2A-206ENST00000600118 AGRPO00253 132 aa12.07□□□□□ -0.48
CHMP2A-206ENST00000600118 FOXE1O00358 373 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms