RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 ISM1B1AKI9 464 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 PEX12O00623 359 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 ZSCAN9O15535 394 aaPredicted RBP13.11□□□□□ -0.31
IRF3-225ENST00000600022 ALDOAP04075 364 aaKnown RBP13.11□□□□□ -0.31
IRF3-225ENST00000600022 APOA4P06727 396 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 VIMP08670 466 aaKnown RBP13.11□□□□□ -0.31
IRF3-225ENST00000600022 SAT1P21673 171 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 GCGRP47871 477 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 ADARP55265 1226 aaKnown RBP13.11□□□□□ -0.31
IRF3-225ENST00000600022 SOX8P57073 446 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 CPLX4Q7Z7G2 160 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 LINC01555Q8NAE3 123 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 LRRC8CQ8TDW0 803 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 HEXDCQ8WVB3 486 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 CKAP2Q8WWK9 683 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 ELMO1Q92556 727 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 CHMP6Q96FZ7 201 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 MAGEB18Q96M61 343 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 IL17FQ96PD4 163 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 CCDC134Q9H6E4 229 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 SLC6A20Q9NP91 592 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 ATP13A2Q9NQ11 1180 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 NDOR1Q9UHB4 597 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 FBXL4Q9UKA2 621 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 MTO1Q9Y2Z2 717 aaKnown RBP13.11□□□□□ -0.31
IRF3-225ENST00000600022 AP1M2Q9Y6Q5 423 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 CSMD2Q7Z408 3487 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 CNTRLQ7Z7A1 2325 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 ANKRD12Q6UB98 2062 aa13.11□□□□□ -0.31
IRF3-225ENST00000600022 DOCK10Q96BY6 2186 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 A0A087X1B8 175 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 A0A096LPK6 155 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 A0A0J9YY10 115 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 KRT87PA6NCN2 255 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 SOCS6O14544 535 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 LRRTM2O43300 516 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 MED26O95402 600 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 COL6A2P12110 1019 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 MAGP20916 626 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 ITGA3P26006 1051 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 VARSP26640 1264 aaKnown RBP13.1□□□□□ -0.31
IRF3-225ENST00000600022 SHMT2P34897 504 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 RAB10P61026 200 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 SRSF11Q05519 484 aaKnown RBP13.1□□□□□ -0.31
IRF3-225ENST00000600022 Q0VFX4 171 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 ITIH4Q14624 930 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 ZKSCAN8Q15776 578 aaPredicted RBP13.1□□□□□ -0.31
IRF3-225ENST00000600022 CCDC153Q494R4 210 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 FAM45BPQ6NSW5 357 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 CNSTQ6PJW8 725 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 KIRREL2Q6UWL6 708 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 SH2D5Q6ZV89 423 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 TTLL10Q6ZVT0 673 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 COX15Q7KZN9 410 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 TBC1D1Q86TI0 1168 aaPredicted RBP13.1□□□□□ -0.31
IRF3-225ENST00000600022 LDB1Q86U70 411 aaPredicted RBP13.1□□□□□ -0.31
IRF3-225ENST00000600022 MCATQ8IVS2 390 aaKnown RBP13.1□□□□□ -0.31
IRF3-225ENST00000600022 PARP9Q8IXQ6 854 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 ZADH2Q8N4Q0 377 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 METTL27Q8N6F8 245 aaPredicted RBP13.1□□□□□ -0.31
IRF3-225ENST00000600022 CATSPER1Q8NEC5 780 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 FAM45AQ8TCE6 357 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 DENND1AQ8TEH3 1009 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 FAM111AQ96PZ2 611 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 MENTQ9BUN1 341 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 IRAK4Q9NWZ3 460 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 STOX2Q9P2F5 926 aaPredicted RBP13.1□□□□□ -0.31
IRF3-225ENST00000600022 OSGIN2Q9Y236 505 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 ACOT9Q9Y305 439 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 PLLPQ9Y342 182 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 COMMD10Q9Y6G5 202 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 DIDO1Q9BTC0 2240 aaKnown RBP13.1□□□□□ -0.31
IRF3-225ENST00000600022 PDZD2O15018 2839 aa13.1□□□□□ -0.31
IRF3-225ENST00000600022 TACC2O95359 2948 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 IQCF5A8MTL0 148 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 E2F3O00716 465 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 NDUFAB1O14561 156 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 NRP2O60462 931 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 HAUS5O94927 633 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 ALPPP05187 535 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 RPS3P23396 243 aaKnown RBP eCLIP13.09□□□□□ -0.317e-7■■■■□ 25.3
IRF3-225ENST00000600022 CCR7P32248 378 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 OR1D4P47884 311 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 MPP2Q14168 576 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 GRB7Q14451 532 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 CYP2A13Q16696 494 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 TSNAXIP1Q2TAA8 658 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 RBM20Q5T481 1227 aaKnown RBP13.09□□□□□ -0.31
IRF3-225ENST00000600022 FCRL6Q6DN72 434 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 KLC3Q6P597 504 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 DCHS2Q6V1P9 2916 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 OVCH1Q7RTY7 1134 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 TBC1D21Q8IYX1 336 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 OR5K2Q8NHB8 316 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 PPP1R14CQ8TAE6 165 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 PROKR1Q8TCW9 393 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 LKAAEAR1Q8TD35 194 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 BCAS4Q8TDM0 211 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 GRHL3Q8TE85 626 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 IP6K3Q96PC2 410 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms