RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 PCDHGA2Q9Y5H1 932 aa14.29□□□□□ -0.12
SYMPK-213ENST00000599460 TRIM43BA6NCK2 446 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 AQP12BA6NM10 295 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 LATO43561 262 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 MED26O95402 600 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 BCHEP06276 602 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 CSTF2P33240 577 aaKnown RBP eCLIP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ACTR3P61158 418 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ADGRE1Q14246 886 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 GPR68Q15743 365 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 DPPA4Q7L190 304 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ISCA2Q86U28 154 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 AQP12AQ8IXF9 295 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ARRDC2Q8TBH0 407 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 TMEM74Q96NL1 305 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 SERTAD3Q9UJW9 196 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 PTGDR2Q9Y5Y4 395 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 LOC285095A0A1B0GVY8 99 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 GLOD5A6NK44 160 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 SDHDO14521 159 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 CAPN5O15484 640 aaPredicted RBP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 PIK3CBP42338 1070 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ATP4BP51164 291 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 TMEM240Q5SV17 173 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 SIX5Q8N196 739 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 MYLIPQ8WY64 445 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 PIGKQ92643 395 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 FUBP1Q96AE4 644 aaKnown RBP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 TRIM43Q96BQ3 446 aaPredicted RBP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 EPB41L1Q9H4G0 881 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 CWH43Q9H720 699 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 C9J4A7 227 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 NOBOXO60393 691 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 OPN1SWP03999 348 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ZNF24P17028 368 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 SGSHP51688 502 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 KRR1Q13601 381 aaKnown RBP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 GRB7Q14451 532 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 PDZK1Q5T2W1 519 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 NOXRED1Q6NXP6 359 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 NEK10Q6ZWH5 1172 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 MEAF6Q9HAF1 191 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 MGRN1O60291 552 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ZBTB11O95625 1053 aaPredicted RBP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 RPS3P23396 243 aaKnown RBP eCLIP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 GSK3BP49841 420 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 VSX2P58304 361 aaPredicted RBP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ABRAXAS2Q15018 415 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 TMEM164Q5U3C3 297 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 KHDRBS2Q5VWX1 349 aaKnown RBP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 PARS2Q7L3T8 475 aaKnown RBP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 AMIGO1Q86WK6 493 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 SLC34A3Q8N130 599 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ZCCHC7Q8N3Z6 543 aaKnown RBP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ZNF671Q8TAW3 534 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 EBF2Q9HAK2 575 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 NEUROD4Q9HD90 331 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ERVK-11Q9UQG0 969 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 PRSS51A0A1B0GVH4 220 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 SLC7A1P30825 629 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 CSNK1DP48730 415 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 ZNF140P52738 457 aaPredicted RBP14.28□□□□□ -0.12
SYMPK-213ENST00000599460 TAZQ16635 292 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 MLIPQ5VWP3 458 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 NT5C3BQ969T7 300 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 NUAK2Q9H093 628 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 C1orf21Q9H246 121 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 COQ10BQ9H8M1 238 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 TPT1P8Q9HAU6 139 aa14.28□□□□□ -0.12
SYMPK-213ENST00000599460 PSMD11O00231 422 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 XKRYO14609 159 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 STX11O75558 287 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 JUPP14923 745 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 DENND1AQ8TEH3 1009 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 SMIM14Q96QK8 99 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 FADS2O95864 444 aaKnown RBP14.27□□□□□ -0.12
SYMPK-213ENST00000599460 AGR2O95994 175 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 TIMP2P16035 220 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 DOC2AQ14183 400 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 CEACAM20Q6UY09 585 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 NFKBIDQ8NI38 313 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 ZDHHC12Q96GR4 267 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 NECTIN3Q9NQS3 549 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 LHX3Q9UBR4 397 aa14.27□□□□□ -0.12
SYMPK-213ENST00000599460 WASH3PC4AMC7 463 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 REM1O75628 298 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 NR2F6P10588 404 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 CCKBRP32239 447 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 NRG3P56975 720 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 RABL3Q5HYI8 236 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 C10orf62Q5T681 223 aaPredicted RBP14.27□□□□□ -0.13
SYMPK-213ENST00000599460 PAIP1Q9H074 479 aaKnown RBP14.27□□□□□ -0.13
SYMPK-213ENST00000599460 PAK6Q9NQU5 681 aaPredicted RBP14.27□□□□□ -0.13
SYMPK-213ENST00000599460 TREX1Q9NSU2 369 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 CITO14578 2027 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 THEGLP0DJG4 465 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 CCT3P49368 545 aaKnown RBP14.27□□□□□ -0.13
SYMPK-213ENST00000599460 SHHQ15465 462 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 TANGO2Q6ICL3 276 aa14.27□□□□□ -0.13
SYMPK-213ENST00000599460 TMIEQ8NEW7 156 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms