RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 SNIP1Q8TAD8 396 aaKnown RBP19.25■□□□□ 0.67
IRF3-221ENST00000598808 ELAC2Q9BQ52 826 aaKnown RBP19.25■□□□□ 0.67
IRF3-221ENST00000598808 MRPL57Q9BQC6 102 aaKnown RBP19.25■□□□□ 0.67
IRF3-221ENST00000598808 MRPL46Q9H2W6 279 aaKnown RBP19.25■□□□□ 0.67
IRF3-221ENST00000598808 TMEM184CQ9NVA4 438 aa19.25■□□□□ 0.67
IRF3-221ENST00000598808 OPTCQ9UBM4 332 aa19.25■□□□□ 0.67
IRF3-221ENST00000598808 FEZF1A0PJY2 475 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 CCDC189A1A4V9 331 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 CLGNO14967 610 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 KLK10O43240 276 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 ZNF749O43361 778 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 TGDSO95455 350 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 STATHP02808 62 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 NEFHP12036 1026 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 TGIF1Q15583 401 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 ZNF425Q6IV72 752 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 C6orf15Q6UXA7 325 aaPredicted RBP19.24■□□□□ 0.67
IRF3-221ENST00000598808 LRRC70Q7Z2Q7 622 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 TBC1D19Q8N5T2 526 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 PTGR2Q8N8N7 351 aaPredicted RBP19.24■□□□□ 0.67
IRF3-221ENST00000598808 RDH11Q8TC12 318 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 SREK1Q8WXA9 508 aaKnown RBP19.24■□□□□ 0.67
IRF3-221ENST00000598808 PHF21BQ96EK2 531 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 NDC1Q9BTX1 674 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 CD244Q9BZW8 370 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 TXLNGQ9NUQ3 528 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 NDOR1Q9UHB4 597 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 PTBP2Q9UKA9 531 aaKnown RBP19.24■□□□□ 0.67
IRF3-221ENST00000598808 ARL2BPQ9Y2Y0 163 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 KLK4Q9Y5K2 254 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 SDK2Q58EX2 2172 aa19.24■□□□□ 0.67
IRF3-221ENST00000598808 LOC105369274A0A096LPK9 316 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 LOC102723532A0A0G2JNH3 316 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 TAF4O00268 1085 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 PLIN3O60664 434 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 BPGMP07738 259 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 MSL3P1P0C860 447 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 TROVE2P10155 538 aaKnown RBP eCLIP19.23■□□□□ 0.671e-6■□□□□ 8.4
IRF3-221ENST00000598808 GNAZP19086 355 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 ARL1P40616 181 aaPredicted RBP19.23■□□□□ 0.67
IRF3-221ENST00000598808 GABRA4P48169 554 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 CSNK1G2P78368 415 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 TCTE1Q5JU00 501 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 NLGN4XQ8N0W4 816 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 OR4N4Q8N0Y3 316 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 CCDC63Q8NA47 563 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 NLGN4YQ8NFZ3 816 aaPredicted RBP19.23■□□□□ 0.67
IRF3-221ENST00000598808 TMEM216Q9P0N5 145 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 ASB1Q9Y576 335 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 APC2O95996 2303 aa19.23■□□□□ 0.67
IRF3-221ENST00000598808 H0YGG7 62 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 SERPIND1P05546 499 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 CCNYL3P0C7X3 344 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 MTHFD2P13995 350 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 ALDH18A1P54886 795 aaKnown RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 ARF3P61204 181 aaPredicted RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 RPS15AP62244 130 aaKnown RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 SETDB1Q15047 1291 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 WASHC2DQ5SRD0 308 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 C1orf189Q5VU69 101 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 TLDC1Q6P9B6 456 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 NXPE4Q6UWF7 544 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 VASH2Q86V25 355 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 NUDCD3Q8IVD9 361 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 ESX1Q8N693 406 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 TEX9Q8N6V9 391 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 CSNK1A1LQ8N752 337 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 ARMC2Q8NEN0 867 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 KLHL14Q9P2G3 628 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 PILRAQ9UKJ1 303 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 TMCO1Q9UM00 188 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 AP1M2Q9Y6Q5 423 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 OR1F1O43749 312 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 H2AFYO75367 372 aaKnown RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 PROCP04070 461 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 ALAS2P22557 587 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 VARSP26640 1264 aaKnown RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 EEF1DP29692 281 aaKnown RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 GGT5P36269 586 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 EIF2S3P41091 472 aaKnown RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 PRKAA2P54646 552 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 CLN3Q13286 438 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 GRM7Q14831 915 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 XKR6Q5GH73 641 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 MANEAQ5SRI9 462 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 FBXO42Q6P3S6 717 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 TIPARPQ7Z3E1 657 aaKnown RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 MYLK4Q86YV6 388 aaPredicted RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 GBP7Q8N8V2 638 aaPredicted RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 UBTD2Q8WUN7 234 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 MR1Q95460 341 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 C7orf26Q96N11 449 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 AIF1LQ9BQI0 150 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 NLNQ9BYT8 704 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 PELI2Q9HAT8 420 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 ACSL6Q9UKU0 697 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 TMEM184BQ9Y519 407 aaPredicted RBP19.22■□□□□ 0.67
IRF3-221ENST00000598808 PCDHB3Q9Y5E6 796 aa19.22■□□□□ 0.67
IRF3-221ENST00000598808 ACACAQ13085 2346 aa19.21■□□□□ 0.67
IRF3-221ENST00000598808 ANKRD11Q6UB99 2663 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms