RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 CLDN9O95484 217 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 MLYCDO95822 493 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 OTCP00480 354 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 VSX2P58304 361 aaPredicted RBP21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 RAB15P59190 212 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 PPP2R2AP63151 447 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 LAPTM5Q13571 262 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 RBBP7Q16576 425 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 GRHL2Q6ISB3 625 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 LETMD1Q6P1Q0 360 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 PPP1R3BQ86XI6 285 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 OR8K5Q8NH50 307 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 USP7Q93009 1102 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 TM4SF19Q96DZ7 209 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 THAP11Q96EK4 314 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 ZNF382Q96SR6 550 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 FANCEQ9HB96 536 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 B3GALT1Q9Y5Z6 326 aa21.55■■□□□ 1.04
SNRNP70-204ENST00000595231 C9orf172C9J069 976 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 H3BQF6 201 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 HNF4AP41235 474 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 RBBP5Q15291 538 aaKnown RBP21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 PAGE2BQ5JRK9 111 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 WASHC2DQ5SRD0 308 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 PRAMEF17Q5VTA0 474 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 PWWP2BQ6NUJ5 590 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 IGF2-ASQ6U949 168 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 ATG14Q6ZNE5 492 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 MILR1Q7Z6M3 343 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 SYVN1Q86TM6 617 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 KRT78Q8N1N4 520 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 N4BP2L2Q92802 583 aaPredicted RBP21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 CNDP1Q96KN2 507 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 DDA1Q9BW61 102 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 STARD5Q9NSY2 213 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 ZFP69BQ9UJL9 534 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 PCDHGA3Q9Y5H0 932 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 AP1M2Q9Y6Q5 423 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 FREM2Q5SZK8 3169 aa21.54■■□□□ 1.04
SNRNP70-204ENST00000595231 OR2B3O76000 313 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 ARRB2P32121 409 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 AHRP35869 848 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 ITGA1P56199 1179 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 HSP90B2PQ58FF3 399 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 DCAF12Q5T6F0 453 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 FAM219BQ5XKK7 198 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 ADNP2Q6IQ32 1131 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 CYB5D1Q6P9G0 228 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 MYLK4Q86YV6 388 aaPredicted RBP21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 LAS2Q8IYD9 372 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 LSMEM2Q8N112 164 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 AGAP11Q8TF27 550 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 H0YIV9 168 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 P2RX6O15547 441 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 NPHS1O60500 1241 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 OR4F21O95013 312 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 CHI3L2Q15782 390 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 CPSF6Q16630 551 aaKnown RBP eCLIP21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 GGTA1PQ4G0N0 100 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 TCTE1Q5JU00 501 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 MED27Q6P2C8 311 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 CEACAM20Q6UY09 585 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 VN1R5Q7Z5H4 357 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.53■■□□□ 1.047e-7■■■■■ 43.5
SNRNP70-204ENST00000595231 TBC1D19Q8N5T2 526 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 OR7G3Q8NG95 312 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 SREK1Q8WXA9 508 aaKnown RBP21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 RERGQ96A58 199 aaPredicted RBP21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 MACROD1Q9BQ69 325 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 TRMOQ9BU70 441 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 ASPSCR1Q9BZE9 553 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 B3GNT4Q9C0J1 378 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 RHBGQ9H310 441 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 ASCL3Q9NQ33 180 aa21.53■■□□□ 1.04
SNRNP70-204ENST00000595231 FITM1A5D6W6 292 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 CDRT15L2A8MXV6 281 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 DXOO77932 396 aaKnown RBP21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 ESRRBO95718 433 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 STATHP02808 62 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 EIF2S1P05198 315 aaKnown RBP21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 NR1D1P20393 614 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 ARL1P40616 181 aaPredicted RBP21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 GCGRP47871 477 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 PKNOX1P55347 436 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 SHC2P98077 582 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 HIST2H2ACQ16777 129 aaPredicted RBP21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 HKDC1Q2TB90 917 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 PRTGQ2VWP7 1150 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 HIST2H2AA3Q6FI13 130 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 GPRIN3Q6ZVF9 776 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 CREB3L4Q8TEY5 395 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 ZPBPQ9BS86 351 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 DRC3Q9H069 523 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 TNFRSF12AQ9NP84 129 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 MID1IP1Q9NPA3 183 aa21.52■■□□□ 1.04
SNRNP70-204ENST00000595231 MED19A0JLT2 244 aaPredicted RBP21.51■■□□□ 1.03
SNRNP70-204ENST00000595231 NVLO15381 856 aaKnown RBP21.51■■□□□ 1.03
SNRNP70-204ENST00000595231 TBX6O95947 436 aaPredicted RBP21.51■■□□□ 1.03
SNRNP70-204ENST00000595231 CHRNGP07510 517 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms