RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TEKT2Q9UIF3 430 aa15.45■□□□□ 0.06
LIG1-205ENST00000593425 SH2B3Q9UQQ2 575 aa15.45■□□□□ 0.06
LIG1-205ENST00000593425 ZKSCAN5Q9Y2L8 839 aa15.45■□□□□ 0.06
LIG1-205ENST00000593425 FBN2P35556 2912 aa15.45■□□□□ 0.06
LIG1-205ENST00000593425 NCOA6Q14686 2063 aaPredicted RBP15.45■□□□□ 0.06
LIG1-205ENST00000593425 SCN3AQ9NY46 2000 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 GFYI3L273 518 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 SKIV2L2P42285 1042 aaKnown RBP15.44■□□□□ 0.06
LIG1-205ENST00000593425 XCR1P46094 333 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 TBPL1P62380 186 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 CTBP1Q13363 440 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 DHX34Q14147 1143 aaKnown RBP15.44■□□□□ 0.06
LIG1-205ENST00000593425 C3AR1Q16581 482 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 PLAG1Q6DJT9 500 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 H3F3CQ6NXT2 135 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 CASC4Q6P4E1 433 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 PIWIL4Q7Z3Z4 852 aaKnown RBP15.44■□□□□ 0.06
LIG1-205ENST00000593425 GDF7Q7Z4P5 450 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 CPNE9Q8IYJ1 553 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 OR51Q1Q8NH59 317 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 ZCCHC10Q8TBK6 192 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 CD200R1Q8TD46 325 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 KCNJ9Q92806 393 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 SIGLEC12Q96PQ1 595 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 GPR21Q99679 349 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 NPAS2Q99743 824 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 EBNA1BP2Q99848 306 aaKnown RBP15.44■□□□□ 0.06
LIG1-205ENST00000593425 HES7Q9BYE0 225 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 RUBCNLQ9H714 662 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 TINAGQ9UJW2 476 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 VPS9D1Q9Y2B5 631 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 CSMD2Q7Z408 3487 aa15.44■□□□□ 0.06
LIG1-205ENST00000593425 CTAGE9A4FU28 777 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 SGK494L7N484 410 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 ZBTB14O43829 449 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 MAN1A2O60476 641 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 SLC19A2O60779 497 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 BCL6P41182 706 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 MAGEA6P43360 314 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 RBPJQ06330 500 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 TUBA3CQ13748 450 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.43■□□□□ 0.063e-9■□□□□ 10
LIG1-205ENST00000593425 ACER2Q5QJU3 275 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 TMEM214Q6NUQ4 689 aaKnown RBP15.43■□□□□ 0.06
LIG1-205ENST00000593425 TUBA3EQ6PEY2 450 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 RPTNQ6XPR3 784 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 UBE2R2Q712K3 238 aaPredicted RBP15.43■□□□□ 0.06
LIG1-205ENST00000593425 ANKRD37Q7Z713 158 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 GAS2L3Q86XJ1 694 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 CRLF3Q8IUI8 442 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 MDS2Q8NDY4 140 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 ZNF354BQ96LW1 612 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 CCDC138Q96M89 665 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 KCNK13Q9HB14 408 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 CCDC177Q9NQR7 707 aaPredicted RBP15.43■□□□□ 0.06
LIG1-205ENST00000593425 TMEM184CQ9NVA4 438 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 ANKRD10Q9NXR5 420 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 KLHL42Q9P2K6 505 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 C19orf25Q9UFG5 118 aaPredicted RBP15.43■□□□□ 0.06
LIG1-205ENST00000593425 DHRS7Q9Y394 339 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 APCP25054 2843 aa15.43■□□□□ 0.06
LIG1-205ENST00000593425 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.42■□□□□ 0.06
LIG1-205ENST00000593425 KCNE1BA0A087WTH5 132 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 ZCWPW2A0A1B0GU75 182 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 FAM237BA0A1B0GVD1 139 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 FEZF1A0PJY2 475 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 KIF5CO60282 957 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 RDH16O75452 317 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 CYC1P08574 325 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 MYBL2P10244 700 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 ENO3P13929 434 aaPredicted RBP15.42■□□□□ 0.06
LIG1-205ENST00000593425 PTGER4P35408 488 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 COILP38432 576 aaPredicted RBP15.42■□□□□ 0.06
LIG1-205ENST00000593425 SLC1A2P43004 574 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 RPS15AP62244 130 aaKnown RBP15.42■□□□□ 0.06
LIG1-205ENST00000593425 CSNK1G2P78368 415 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 GPS1Q13098 491 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 THOC5Q13769 683 aaKnown RBP15.42■□□□□ 0.06
LIG1-205ENST00000593425 PTK6Q13882 451 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 CDSNQ15517 529 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 ZXDCQ2QGD7 858 aaPredicted RBP15.42■□□□□ 0.06
LIG1-205ENST00000593425 MTFR2Q6P444 385 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 PDSS2Q86YH6 399 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 KCT2Q8NC54 265 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 MCOLN3Q8TDD5 553 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 MAIP1Q8WWC4 291 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 LURAP1Q96LR2 239 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 RBCK1Q9BYM8 510 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 TSPAN10Q9H1Z9 355 aaPredicted RBP15.42■□□□□ 0.06
LIG1-205ENST00000593425 CCDC68Q9H2F9 335 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 CHST11Q9NPF2 352 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 KLHL1Q9NR64 748 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 SAMD15Q9P1V8 674 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 ADAMTS6Q9UKP5 1117 aa15.42■□□□□ 0.06
LIG1-205ENST00000593425 PDZD2O15018 2839 aa15.41■□□□□ 0.06
LIG1-205ENST00000593425 FAM227AF5H4B4 570 aa15.41■□□□□ 0.06
LIG1-205ENST00000593425 C19orf84I3L1E1 186 aa15.41■□□□□ 0.06
LIG1-205ENST00000593425 CDC123O75794 336 aaPredicted RBP15.41■□□□□ 0.06
LIG1-205ENST00000593425 CDC25BP30305 580 aa15.41■□□□□ 0.06
LIG1-205ENST00000593425 CD96P40200 585 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms