RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 A1L4Q6 167 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 PABPN1LA6NDY0 278 aaKnown RBP12.57□□□□□ -0.4
APOC1-209ENST00000592885 FFAR3O14843 346 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 GPR42O15529 346 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 HIST1H2AGP0C0S8 130 aaPredicted RBP12.57□□□□□ -0.4
APOC1-209ENST00000592885 SLC35G6P0C7Q6 338 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 MYBL2P10244 700 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 HIST1H2ADP20671 130 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 AGTR2P50052 363 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 AP1S2P56377 157 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 CSNK1G2P78368 415 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
APOC1-209ENST00000592885 CAPN13Q6MZZ7 669 aaPredicted RBP12.57□□□□□ -0.4
APOC1-209ENST00000592885 TMEM214Q6NUQ4 689 aaKnown RBP12.57□□□□□ -0.4
APOC1-209ENST00000592885 NIPAL1Q6NVV3 410 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 AGTRAPQ6RW13 159 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 SYDE1Q6ZW31 735 aaPredicted RBP12.57□□□□□ -0.4
APOC1-209ENST00000592885 PLD3Q8IV08 490 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 SLC35F6Q8N357 371 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 OR1N1Q8NGS0 311 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 EEF1AKMT1Q8WVE0 214 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 TM4SF19Q96DZ7 209 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 CERS2Q96G23 380 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 HIST1H2AHQ96KK5 128 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 RUNDC3BQ96NL0 473 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 NDNQ99608 321 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 HIST1H2AJQ99878 128 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 H2AFJQ9BTM1 129 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 SARGQ9BW04 601 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 SGPP1Q9BX95 441 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 OLAHQ9NV23 265 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 PTGFRNQ9P2B2 879 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 TEKT2Q9UIF3 430 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 ADAMTS6Q9UKP5 1117 aa12.57□□□□□ -0.4
APOC1-209ENST00000592885 UTP20O75691 2785 aaKnown RBP12.57□□□□□ -0.4
APOC1-209ENST00000592885 CNTRLQ7Z7A1 2325 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 ABCB7O75027 752 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 CLDN1O95832 211 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 ENO2P09104 434 aaPredicted RBP12.56□□□□□ -0.4
APOC1-209ENST00000592885 TCP1P17987 556 aaKnown RBP12.56□□□□□ -0.4
APOC1-209ENST00000592885 IL10P22301 178 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 BCL6P41182 706 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 SKP1P63208 163 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 MAT1AQ00266 395 aaKnown RBP12.56□□□□□ -0.4
APOC1-209ENST00000592885 TIAL1Q01085 375 aaKnown RBP eCLIP12.56□□□□□ -0.4
APOC1-209ENST00000592885 SYT16Q17RD7 645 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 ZNF324BQ6AW86 544 aaPredicted RBP12.56□□□□□ -0.4
APOC1-209ENST00000592885 FAAH2Q6GMR7 532 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 PAQR3Q6TCH7 311 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 ASPGQ86U10 573 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 SIRT6Q8N6T7 355 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 OR9A4Q8NGU2 314 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 SUN3Q8TAQ9 357 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 ATL1Q8WXF7 558 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 LRRC39Q96DD0 335 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 LINGO1Q96FE5 620 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 IMMP1LQ96LU5 166 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 VN1R1Q9GZP7 353 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 ANKHQ9HCJ1 492 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 SLC22A7Q9Y694 548 aa12.56□□□□□ -0.4
APOC1-209ENST00000592885 A0A1B0GUH1 482 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 STSP08842 583 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 ITGAMP11215 1152 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 IL1RNP18510 177 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 GABRB3P28472 473 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 XCR1P46094 333 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 TDGF1P3P51864 188 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 CDKN2DP55273 166 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 IL2P60568 153 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 PDAP1Q13442 181 aaKnown RBP12.55□□□□□ -0.4
APOC1-209ENST00000592885 NAE1Q13564 534 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 FRG1Q14331 258 aaKnown RBP12.55□□□□□ -0.4
APOC1-209ENST00000592885 MORF4L2Q15014 288 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 HERC3Q15034 1050 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
APOC1-209ENST00000592885 ABHD17BQ5VST6 288 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 DUPD1Q68J44 220 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 PLAG1Q6DJT9 500 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 HIST2H2BCQ6DN03 193 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 FAM45BPQ6NSW5 357 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 HIBCHQ6NVY1 386 aaPredicted RBP12.55□□□□□ -0.4
APOC1-209ENST00000592885 CPEB2Q7Z5Q1 589 aaKnown RBP12.55□□□□□ -0.4
APOC1-209ENST00000592885 STRA8Q7Z7C7 330 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 PDIK1LQ8N165 341 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 TBC1D19Q8N5T2 526 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 MFSD9Q8NBP5 474 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 CATSPER1Q8NEC5 780 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 ABHD11Q8NFV4 315 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 OR51Q1Q8NH59 317 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 DNAJB8Q8NHS0 232 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 FAM45AQ8TCE6 357 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 SLC13A3Q8WWT9 602 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 NR4A3Q92570 626 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 OR1F2PQ96R84 312 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 TRIM54Q9BYV2 358 aa12.55□□□□□ -0.4
APOC1-209ENST00000592885 DDX47Q9H0S4 455 aaKnown RBP12.55□□□□□ -0.4
APOC1-209ENST00000592885 OR5H15A6NDH6 313 aa12.54□□□□□ -0.4
APOC1-209ENST00000592885 JRKO75564 520 aa12.54□□□□□ -0.4
APOC1-209ENST00000592885 TSPAN12O95859 305 aa12.54□□□□□ -0.4
APOC1-209ENST00000592885 CRYABP02511 175 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms