RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 XKR6Q5GH73 641 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 C6orf15Q6UXA7 325 aaPredicted RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 ZYG11AQ6WRX3 759 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 RPS27LQ71UM5 84 aaKnown RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 GOLGA7Q7Z5G4 137 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 EXOC3L1Q86VI1 746 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 CACNA2D3Q8IZS8 1091 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 NLGN4XQ8N0W4 816 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 ARHGEF39Q8N4T4 335 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 CSNK1A1LQ8N752 337 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 ANKRD53Q8N9V6 530 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 ZNF248Q8NDW4 579 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 NLGN4YQ8NFZ3 816 aaPredicted RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 ZNF483Q8TF39 744 aaPredicted RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 RERGQ96A58 199 aaPredicted RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 CLIP3Q96DZ5 547 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 THAP11Q96EK4 314 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 MOCOSQ96EN8 888 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 LRFN5Q96NI6 719 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 NSUN5Q96P11 429 aaKnown RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 SMC6Q96SB8 1091 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 MACROD1Q9BQ69 325 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 AIF1LQ9BQI0 150 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 NDC1Q9BTX1 674 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 C1QTNF3Q9BXJ4 246 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 IPPKQ9H8X2 491 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 ZBTB26Q9HCK0 441 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 ACSS2Q9NR19 701 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 ARGLU1Q9NWB6 273 aaPredicted RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 SENP1Q9P0U3 644 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 COPG2Q9UBF2 871 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 PCTPQ9UKL6 214 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 ZNF490Q9ULM2 529 aaPredicted RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 RUVBL1Q9Y265 456 aaKnown RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 ANGPTL3Q9Y5C1 460 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 AGPSO00116 658 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 MEN1O00255 615 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 OR7A17O14581 309 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 TYROBPO43914 113 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 HBQ1P09105 142 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 MYZAPP0CAP1 466 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 MYL2P10916 166 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 CPA3P15088 417 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 ITGAXP20702 1163 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 IMPDH1P20839 514 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 AHRP35869 848 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 PIK3CGP48736 1102 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 EMP3P54852 163 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 HERVK_113P63132 956 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 SNRPNP63162 240 aaKnown RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 SRSF6Q13247 344 aaKnown RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 RBBP5Q15291 538 aaKnown RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 UNC50Q53HI1 259 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 ZNF678Q5SXM1 525 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 C1orf189Q5VU69 101 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 YOD1Q5VVQ6 348 aaPredicted RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 ZNF385CQ66K41 422 aaPredicted RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 ADNP2Q6IQ32 1131 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 LCN10Q6JVE6 187 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 RHBDD2Q6NTF9 364 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 TMIGD1Q6UXZ0 262 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 ZNF517Q6ZMY9 492 aaPredicted RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 ASPGQ86U10 573 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 SLC22A9Q8IVM8 553 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.48□□□□□ -0.89
TPM4-216ENST00000592822 DSELQ8IZU8 1212 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 DTWD1Q8N5C7 304 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 TBC1D19Q8N5T2 526 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 ESX1Q8N693 406 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 TTC29Q8NA56 475 aaPredicted RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 ARMC2Q8NEN0 867 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 RDH11Q8TC12 318 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 TCP10LQ8TDR4 215 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 KCNE4Q8WWG9 221 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 SLC13A3Q8WWT9 602 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 L3HYPDHQ96EM0 354 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 PTCD3Q96EY7 689 aaKnown RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 C10orf90Q96M02 699 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 GBP5Q96PP8 586 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 FAM111AQ96PZ2 611 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 TMEM237Q96Q45 408 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 EFCAB11Q9BUY7 163 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 ERVK-6Q9BXR3 956 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 NT5DC2Q9H857 520 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 NOL11Q9H8H0 719 aaKnown RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 TMBIM4Q9HC24 238 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 LHX9Q9NQ69 397 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 CUTCQ9NTM9 273 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 SLC17A7Q9P2U7 560 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 DHCR7Q9UBM7 475 aaKnown RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 ZFP69BQ9UJL9 534 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 PADI1Q9ULC6 663 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 SRPK3Q9UPE1 567 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
TPM4-216ENST00000592822 MRPS2Q9Y399 296 aaKnown RBP9.48□□□□□ -0.89
TPM4-216ENST00000592822 USP24Q9UPU5 2620 aa9.47□□□□□ -0.89
TPM4-216ENST00000592822 A0A087WV48 116 aa9.47□□□□□ -0.89
TPM4-216ENST00000592822 LOC101059948A0A1B0GTJ6 334 aa9.47□□□□□ -0.89
TPM4-216ENST00000592822 A0A1B0GTL3 188 aa9.47□□□□□ -0.89
TPM4-216ENST00000592822 A0A1B0GX78 115 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms