RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 METAP1P53582 386 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 LRRC74AQ0VAA2 488 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 GRSF1Q12849 480 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 TSTA3Q13630 321 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 TUBA3CQ13748 450 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 VEZF1Q14119 521 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 CTU2Q2VPK5 515 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 C10orf62Q5T681 223 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 ARHGAP22Q7Z5H3 698 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 HORMAD1Q86X24 394 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 SYNPOQ8N3V7 929 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 CPA6Q8N4T0 437 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 TMIEQ8NEW7 156 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 NXPE3Q969Y0 559 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 ARRDC3Q96B67 414 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 CXorf40BQ96DE9 158 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 MAGED4Q96JG8 741 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 HSH2DQ96JZ2 352 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 DPH2Q9BQC3 489 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 EFCAB11Q9BUY7 163 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 RWDD3Q9Y3V2 267 aa15.98■□□□□ 0.15
PRKCSH-217ENST00000592741 EDDM13A0A1B0GTR0 161 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 MYO1GB0I1T2 1018 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 LILRB5O75023 590 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 IDSP22304 550 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 DNAJA1P31689 397 aaKnown RBP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 STARD3Q14849 445 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 PAGE2BQ5JRK9 111 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 RBM23Q86U06 439 aaKnown RBP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 OR9A1PQ8NGU1 263 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 ZNF707Q96C28 371 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 COQ8BQ96D53 544 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 WDR34Q96EX3 536 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 GULP1Q9UBP9 304 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 FZD4Q9ULV1 537 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 VPS4AQ9UN37 437 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 ERVK-11Q9UQG0 969 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 HEMK1Q9Y5R4 338 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 PRRT4C9JH25 899 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 hCG_2039718K7EN88 272 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 LZTS3O60299 673 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 UGT2B11O75310 529 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 SEC14L2O76054 403 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 FKBP9O95302 570 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 C6P13671 934 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 HLA-EP13747 358 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 FPR1P21462 350 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 RYKP34925 604 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 RPS6KA3P51812 740 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 ISL1P61371 349 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 FPGSQ05932 587 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 SLBPQ14493 270 aaKnown RBP eCLIP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 HIST2H2ACQ16777 129 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 HIST2H2AA3Q6FI13 130 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 TRMT11Q7Z4G4 463 aaKnown RBP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 GALNT10Q86SR1 603 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 SPARTQ8N0X7 666 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 KIAA1958Q8N8K9 716 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 SETD9Q8NE22 299 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 PIK3C3Q8NEB9 887 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 OR4A15Q8NGL6 344 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 ZNF514Q96K75 400 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 SGPP1Q9BX95 441 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 ITM2CQ9NQX7 267 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 SH3BP4Q9P0V3 963 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 ZNF282Q9UDV7 671 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 DPP7Q9UHL4 492 aa15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 NUP210Q8TEM1 1887 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-217ENST00000592741 C1orf226A1L170 272 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 K7ESM1 405 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 FOXE1O00358 373 aaPredicted RBP15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 RNASET2O00584 256 aaKnown RBP15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 POU2F2P09086 479 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 C1GALT1C1LP0DN25 315 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 TMBIM6P55061 237 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 HNRNPA1L2Q32P51 320 aaKnown RBP15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 CATSPEREQ5SY80 951 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 C9orf64Q5T6V5 341 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 XAF1Q6GPH4 301 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 GALNT18Q6P9A2 607 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 EP400NLQ6ZTU2 488 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 VTCN1Q7Z7D3 282 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 ETFBKMTQ8IXQ9 262 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 RSPRY1Q96DX4 576 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 PPP1R16AQ96I34 528 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 BHLHE41Q9C0J9 482 aaPredicted RBP15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 NAA50Q9GZZ1 169 aaKnown RBP15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 SNX5Q9Y5X3 404 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 GMEB1Q9Y692 573 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 AP1M2Q9Y6Q5 423 aa15.96■□□□□ 0.15
PRKCSH-217ENST00000592741 SLC1A7O00341 560 aa15.95■□□□□ 0.14
PRKCSH-217ENST00000592741 MITFO75030 526 aaPredicted RBP15.95■□□□□ 0.14
PRKCSH-217ENST00000592741 NFATC1O95644 943 aa15.95■□□□□ 0.14
PRKCSH-217ENST00000592741 NPPBP16860 134 aa15.95■□□□□ 0.14
PRKCSH-217ENST00000592741 ZNF763Q0D2J5 394 aa15.95■□□□□ 0.14
PRKCSH-217ENST00000592741 TMEM240Q5SV17 173 aa15.95■□□□□ 0.14
PRKCSH-217ENST00000592741 CEP68Q76N32 757 aa15.95■□□□□ 0.14
PRKCSH-217ENST00000592741 GALNT5Q7Z7M9 940 aa15.95■□□□□ 0.14
PRKCSH-217ENST00000592741 LAS2Q8IYD9 372 aa15.95■□□□□ 0.14
PRKCSH-217ENST00000592741 ZFP90Q8TF47 636 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms