RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CCSER1Q9C0I3 900 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 TMEM245Q9H330 911 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 DCTPP1Q9H773 170 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 LIN28AQ9H9Z2 209 aaKnown RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 TRPC7Q9HCX4 862 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 MRPL40Q9NQ50 206 aaKnown RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 PFDN4Q9NQP4 134 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 RMND1Q9NWS8 449 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 GID8Q9NWU2 228 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 MARCH4Q9P2E8 410 aaPredicted RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 LARSQ9P2J5 1176 aaKnown RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 SEC63Q9UGP8 760 aaKnown RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 HMGXB4Q9UGU5 601 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 LCMT1Q9UIC8 334 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 DBNLQ9UJU6 430 aaKnown RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 VPS28Q9UK41 221 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 SNX6Q9UNH7 406 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 GPR34Q9UPC5 381 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 TMEM184BQ9Y519 407 aaPredicted RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 FAM169AQ9Y6X4 670 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 COMMD3-BMI1R4GMX3 469 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 POLA1P09884 1462 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 PRAG1Q86YV5 1406 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 NSD2O96028 1365 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 ATP8B3O60423 1300 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TTC41PQ6P2S7 1318 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TTC21AQ8NDW8 1320 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 A0A1W2PR77 199 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 A0A1W2PS18 150 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TMEM8BA6NDV4 472 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 NCF1BA6NI72 391 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 SLC9B1P1A6NJY1 282 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 NCF1CA8MVU1 366 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 C16orf97H3BN30 126 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 BMPR1BO00238 502 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 CHMP2AO43633 222 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 GATCO43716 136 aaKnown RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 PRPSAP2O60256 369 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 SOCS5O75159 536 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 ZNF217O75362 1048 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 SEC22BO75396 215 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 GJB3O75712 270 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 WISP2O76076 250 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 PGM3O95394 542 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 KRT75O95678 551 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 CLPTM1O96005 669 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 OPN1LWP04000 364 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 RETP07949 1114 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 HMOX1P09601 288 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 CETPP11597 493 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 ANXA8P13928 327 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 RAB4AP20338 218 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 SP100P23497 879 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 PPP2R1AP30153 589 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 NMT1P30419 496 aaKnown RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 FMO5P49326 533 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 STAT2P52630 851 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 CD81P60033 236 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 EEF1A1P68104 462 aaKnown RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 PITX1P78337 314 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 BEX3Q00994 111 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 RIPPLY1Q0D2K3 151 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TFCP2Q12800 502 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 AIMP2Q13155 320 aaKnown RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 SGCGQ13326 291 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 MVPQ14764 893 aaKnown RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 SGSM1Q2NKQ1 1148 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 KLHL38Q2WGJ6 581 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 MAJINQ3KP22 176 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 C2orf76Q3KRA6 126 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 ZCWPW2Q504Y3 356 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 RAB6CQ53S08 254 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 RAB41Q5JT25 222 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TOR1AIP1Q5JTV8 583 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 C6orf163Q5TEZ5 329 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 ANXA8L1Q5VT79 327 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 EEF1A1P5Q5VTE0 462 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 PM20D1Q6GTS8 502 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 ARHGAP11AQ6P4F7 1023 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 CYB5D1Q6P9G0 228 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 IYDQ6PHW0 289 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TRIM65Q6PJ69 517 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 BLOC1S2Q6QNY1 142 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 MACC1Q6ZN28 852 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 KCTD8Q6ZWB6 473 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 Q75L30 129 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 DNAJB7Q7Z6W7 309 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 SMIM29Q86T20 159 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 ZNF677Q86XU0 584 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 ERO1BQ86YB8 467 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 CDKL3Q8IVW4 592 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 CEP97Q8IW35 865 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 CIARTQ8N365 385 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 SLC5A8Q8N695 610 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 C10orf53Q8N6V4 93 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 NAT8LQ8N9F0 302 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 ICA1LQ8NDH6 482 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 LPCAT1Q8NF37 534 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 OR13A1Q8NGR1 328 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 OR52I2Q8NH67 350 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms