RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 SLC1A6P48664 564 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 EMP3P54852 163 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 CLDN6P56747 220 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 RAB15P59190 212 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 ARF3P61204 181 aaPredicted RBP11.64□□□□□ -0.55
DNMT1-218ENST00000589294 ABCE1P61221 599 aaKnown RBP11.64□□□□□ -0.55
DNMT1-218ENST00000589294 MEF2AQ02078 507 aaPredicted RBP11.64□□□□□ -0.55
DNMT1-218ENST00000589294 ZNF33BQ06732 778 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 TUBB3Q13509 450 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 PWP1Q13610 501 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 KCNAB1Q14722 419 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 RBBP5Q15291 538 aaKnown RBP11.64□□□□□ -0.55
DNMT1-218ENST00000589294 CPSF6Q16630 551 aaKnown RBP eCLIP11.64□□□□□ -0.55
DNMT1-218ENST00000589294 ZCCHC23Q6ZST2 131 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 SYVN1Q86TM6 617 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 KIRREL3Q8IZU9 778 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 LSMEM2Q8N112 164 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 ZNF655Q8N720 491 aaPredicted RBP11.64□□□□□ -0.55
DNMT1-218ENST00000589294 CAMKVQ8NCB2 501 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 OR7G3Q8NG95 312 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 FAM76AQ8TAV0 307 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 METTL6Q8TCB7 284 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 AGAP11Q8TF27 550 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 CKAP2Q8WWK9 683 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 ZNF75CPQ92670 426 aaPredicted RBP11.64□□□□□ -0.55
DNMT1-218ENST00000589294 TM4SF19Q96DZ7 209 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 OR6C1Q96RD1 312 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 SLC29A3Q9BZD2 475 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 ASPSCR1Q9BZE9 553 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 ILKAPQ9H0C8 392 aaPredicted RBP11.64□□□□□ -0.55
DNMT1-218ENST00000589294 THAP1Q9NVV9 213 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 OCIAD1Q9NX40 245 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 SLC39A1Q9NY26 324 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 ZNF225Q9UK10 706 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 SNX6Q9UNH7 406 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 PCDHGA8Q9Y5G5 932 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 PCDHGA4Q9Y5G9 962 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 HEATR5BQ9P2D3 2071 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 LOC105369274A0A096LPK9 316 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 LOC102723532A0A0G2JNH3 316 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 A0A1B0GTL3 188 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 FITM1A5D6W6 292 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 ANKDD1BA6NHY2 528 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 FOXE1O00358 373 aaPredicted RBP11.63□□□□□ -0.55
DNMT1-218ENST00000589294 POLR1CO15160 346 aaPredicted RBP11.63□□□□□ -0.55
DNMT1-218ENST00000589294 HCRTR1O43613 425 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 NRP2O60462 931 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 CLEC3AO75596 197 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 OR4F21O95013 312 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 HSPA4LO95757 839 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 KRT6AP02538 564 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 KRT6BP04259 564 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 JMJD7P0C870 316 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 UROSP10746 265 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 CCL4P13236 92 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 BCL6P41182 706 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 KRT6CP48668 564 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 ATP1A2P50993 1020 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 ITGA1P56199 1179 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 FOXM1Q08050 763 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 BST1Q10588 318 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 ZRSR2Q15696 482 aaKnown RBP11.63□□□□□ -0.55
DNMT1-218ENST00000589294 GPR19Q15760 415 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 FAM214AQ32MH5 1076 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.63□□□□□ -0.55
DNMT1-218ENST00000589294 WASHC2DQ5SRD0 308 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 DCAF12Q5T6F0 453 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 FRG2Q64ET8 278 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 FRMPD2BQ6IN97 320 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 LETMD1Q6P1Q0 360 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 TLDC1Q6P9B6 456 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 DGLUCYQ7Z3D6 616 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 CUZD1Q86UP6 607 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 PPP1R3BQ86XI6 285 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 MYLK4Q86YV6 388 aaPredicted RBP11.63□□□□□ -0.55
DNMT1-218ENST00000589294 PLD3Q8IV08 490 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 GPR135Q8IZ08 494 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 CLYBLQ8N0X4 340 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 OR4N4Q8N0Y3 316 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 ANKRD53Q8N9V6 530 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 LRRC8CQ8TDW0 803 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 SLC13A3Q8WWT9 602 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 MAGEB18Q96M61 343 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 CDK15Q96Q40 435 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 TEFMQ96QE5 360 aaKnown RBP11.63□□□□□ -0.55
DNMT1-218ENST00000589294 FRG2BQ96QU4 278 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 TAAR9Q96RI9 348 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 NLNQ9BYT8 704 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 NRSN2Q9GZP1 204 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 SPNS1Q9H2V7 528 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 POLR1BQ9H9Y6 1135 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 FAM53CQ9NYF3 392 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 RARRES3Q9UL19 164 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 PPT2Q9UMR5 302 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 TRAF6Q9Y4K3 522 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 PCDHGA3Q9Y5H0 932 aa11.63□□□□□ -0.55
DNMT1-218ENST00000589294 COL27A1Q8IZC6 1860 aaPredicted RBP11.63□□□□□ -0.55
DNMT1-218ENST00000589294 SNRNP200O75643 2136 aaKnown RBP11.62□□□□□ -0.55
DNMT1-218ENST00000589294 SERTM1A2A2V5 107 aa11.62□□□□□ -0.55
DNMT1-218ENST00000589294 FAM149AA5PLN7 773 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms