RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 FRA10AC1Q70Z53 315 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 THOC6Q86W42 341 aaKnown RBP13.18□□□□□ -0.3
ERCC1-208ENST00000589165 TMEM151BQ8IW70 566 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 KLHDC8AQ8IYD2 350 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 AMER3Q8N944 861 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 MFSD9Q8NBP5 474 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 CAMKVQ8NCB2 501 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 STT3BQ8TCJ2 826 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 SLC5A11Q8WWX8 675 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 NEIL2Q969S2 332 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 RHBDF1Q96CC6 855 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 CYTH2Q99418 400 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 EGFL8Q99944 293 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 SLC25A23Q9BV35 468 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 FUT8Q9BYC5 575 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 TGIF2Q9GZN2 237 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 SEMA3GQ9NS98 782 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 NINJ2Q9NZG7 142 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 ANAPC2Q9UJX6 822 aa13.18□□□□□ -0.3
ERCC1-208ENST00000589165 MYO18BQ8IUG5 2567 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 TRBC2A0A5B9 178 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 FEZF1A0PJY2 475 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 H0YIG0 161 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 LCMT2O60294 686 aaKnown RBP13.17□□□□□ -0.3
ERCC1-208ENST00000589165 H2AFXP16104 143 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-208ENST00000589165 CRABP2P29373 138 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 ECHS1P30084 290 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 GGT5P36269 586 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 SLC6A12P48065 614 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 PGDP52209 483 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 KLRB1Q12918 225 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 CSHL1Q14406 222 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 UBAP2Q5T6F2 1119 aaKnown RBP13.17□□□□□ -0.3
ERCC1-208ENST00000589165 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 ASPGQ86U10 573 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 PTRH1Q86Y79 214 aaKnown RBP13.17□□□□□ -0.3
ERCC1-208ENST00000589165 TCAIMQ8N3R3 496 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 SPATA6LQ8N4H0 392 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 TBC1D19Q8N5T2 526 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 CLEC1AQ8NC01 280 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 SLC13A3Q8WWT9 602 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 IFT81Q8WYA0 676 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 KIAA1191Q96A73 305 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 MIEF2Q96C03 454 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 MMABQ96EY8 250 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-208ENST00000589165 FMO2Q99518 471 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 SOX17Q9H6I2 414 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-208ENST00000589165 ACSS3Q9H6R3 686 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 PELI2Q9HAT8 420 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 MKKSQ9NPJ1 570 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-208ENST00000589165 C14orf105Q9NVL8 296 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 SLC22A14Q9Y267 594 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 MAP4K5Q9Y4K4 846 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 HS3ST3B1Q9Y662 390 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 KCNE2Q9Y6J6 123 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 MDC1Q14676 2089 aaKnown RBP13.17□□□□□ -0.3
ERCC1-208ENST00000589165 CCDC88CQ9P219 2028 aa13.17□□□□□ -0.3
ERCC1-208ENST00000589165 A0A0A6YYC8 382 aaPredicted RBP13.16□□□□□ -0.3
ERCC1-208ENST00000589165 I3L1I5 382 aaPredicted RBP13.16□□□□□ -0.3
ERCC1-208ENST00000589165 SOCS6O14544 535 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 NSA2O95478 260 aaKnown RBP13.16□□□□□ -0.3
ERCC1-208ENST00000589165 PDGFAP04085 211 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 TUBBP07437 444 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 SLC35E2BP0CK96 405 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 CASRP41180 1078 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 AVPR1BP47901 424 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 KLC1Q07866 573 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 PWP1Q13610 501 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 SLMAPQ14BN4 828 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 EFTUD2Q15029 972 aaKnown RBP eCLIP13.16□□□□□ -0.33e-7■■■■■ 48.8
ERCC1-208ENST00000589165 OR4D1Q15615 310 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 CATSPEREQ5SY80 951 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 SHISA6Q6ZSJ9 500 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 PRICKLE2Q7Z3G6 844 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 MTERF4Q7Z6M4 381 aaKnown RBP13.16□□□□□ -0.3
ERCC1-208ENST00000589165 GPSM1Q86YR5 675 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 FDCSPQ8NFU4 85 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 VPS50Q96JG6 964 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 TRPC4Q9UBN4 977 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 G3BP2Q9UN86 482 aaKnown RBP13.16□□□□□ -0.3
ERCC1-208ENST00000589165 MRPS2Q9Y399 296 aaKnown RBP13.16□□□□□ -0.3
ERCC1-208ENST00000589165 DYRK1BQ9Y463 629 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 SLC22A7Q9Y694 548 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 TENM4Q6N022 2769 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 HMX2A2RU54 273 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 J3QKU1 62 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 PCDH17O14917 1159 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 OR1F1O43749 312 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 KLHL41O60662 606 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 IPO13O94829 963 aaKnown RBP13.16□□□□□ -0.3
ERCC1-208ENST00000589165 SLC35G6P0C7Q6 338 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 GNAZP19086 355 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 NR1D1P20393 614 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 AHRP35869 848 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 SCTRP47872 440 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 CSRP3P50461 194 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 SNRPNP63162 240 aaKnown RBP13.16□□□□□ -0.3
ERCC1-208ENST00000589165 MEF2AQ02078 507 aaPredicted RBP13.16□□□□□ -0.3
ERCC1-208ENST00000589165 VWA2Q5GFL6 755 aa13.16□□□□□ -0.3
ERCC1-208ENST00000589165 SULT1C3Q6IMI6 304 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms