RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 C9orf106Q8NAJ2 232 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 LPCAT1Q8NF37 534 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 CAVIN3Q969G5 261 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 MVB12AQ96EY5 273 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 MMABQ96EY8 250 aaPredicted RBP6.33□□□□□ -1.4
TPM4-210ENST00000588507 C11orf24Q96F05 449 aaPredicted RBP6.33□□□□□ -1.4
TPM4-210ENST00000588507 PLPPR2Q96GM1 343 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 TEKT5Q96M29 485 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 FAM173AQ9BQD7 235 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 HGH1Q9BTY7 390 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 RSPO3Q9BXY4 272 aaPredicted RBP6.33□□□□□ -1.4
TPM4-210ENST00000588507 XPO4Q9C0E2 1151 aaKnown RBP6.33□□□□□ -1.4
TPM4-210ENST00000588507 GRIP2Q9C0E4 1043 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 CALHM2Q9HA72 323 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 UGT1A8Q9HAW9 530 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 ACP6Q9NPH0 428 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 ERVK-11Q9UQG0 969 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 CHKBQ9Y259 395 aa6.33□□□□□ -1.4
TPM4-210ENST00000588507 A0A0G2JMM0 328 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 A0A1W2PPB8 328 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 A0A1W2PRS3 328 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 KIR3DP1A8MWS1 328 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 C16orf97H3BN30 126 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 IFRD1O00458 451 aaPredicted RBP6.32□□□□□ -1.4
TPM4-210ENST00000588507 MSTNO14793 375 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 TIMM23O14925 209 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 UGT1A9O60656 530 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 FTCDO95954 541 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 CSF3P09919 207 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 PCMT1P22061 227 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 CD86P42081 329 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 RPL26P61254 145 aaKnown RBP6.32□□□□□ -1.4
TPM4-210ENST00000588507 UBA52P62987 128 aaKnown RBP6.32□□□□□ -1.4
TPM4-210ENST00000588507 DPYSQ14117 519 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 SYT16Q17RD7 645 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 C15orf59Q2T9L4 293 aaPredicted RBP6.32□□□□□ -1.4
TPM4-210ENST00000588507 ATP13A5Q4VNC0 1218 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 C22orf34Q6ZV56 151 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 SLFN11Q7Z7L1 901 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 CFAP206Q8IYR0 622 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 ARMC10Q8N2F6 343 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 LILRB1Q8NHL6 650 aaPredicted RBP6.32□□□□□ -1.4
TPM4-210ENST00000588507 NEIL3Q8TAT5 605 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 FAM71BQ8TC56 605 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 GTF3AQ92664 365 aaKnown RBP6.32□□□□□ -1.4
TPM4-210ENST00000588507 C3orf49Q96BT1 292 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 EID2BQ96D98 161 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 CABS1Q96KC9 395 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 C10orf90Q96M02 699 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 ZFP3Q96NJ6 502 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 TRAF4Q9BUZ4 470 aaPredicted RBP6.32□□□□□ -1.4
TPM4-210ENST00000588507 INTS7Q9NVH2 962 aaKnown RBP6.32□□□□□ -1.4
TPM4-210ENST00000588507 GAR1Q9NY12 217 aaKnown RBP6.32□□□□□ -1.4
TPM4-210ENST00000588507 OR6C2Q9NZP2 312 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 TMEM59LQ9UK28 342 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 PACSIN3Q9UKS6 424 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 PCDHGC3Q9UN70 934 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 RPL26L1Q9UNX3 145 aaKnown RBP6.32□□□□□ -1.4
TPM4-210ENST00000588507 B3GALT5Q9Y2C3 310 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 FAM169AQ9Y6X4 670 aa6.32□□□□□ -1.4
TPM4-210ENST00000588507 PLCE1Q9P212 2302 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 C15orf38-AP3S2A0A0A6YYH1 394 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 GOLGA6L4A6NEF3 574 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 GOLGA6L9A6NEM1 432 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 G3V3Y1 287 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 G3V4G9 280 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 B4GALT2O60909 372 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 PPP1R3DO95685 299 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 PRLP01236 227 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 CD8AP01732 235 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 EIF2S1P05198 315 aaKnown RBP6.31□□□□□ -1.4
TPM4-210ENST00000588507 NUDT17P0C025 328 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 EPB41P11171 864 aaKnown RBP6.31□□□□□ -1.4
TPM4-210ENST00000588507 POU2F1P14859 743 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 CA4P22748 312 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 CCKARP32238 428 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 HTR7P34969 479 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 EMP3P54852 163 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 BOP1Q14137 746 aaKnown RBP6.31□□□□□ -1.4
TPM4-210ENST00000588507 LDLRAP1Q5SW96 308 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 SYDE1Q6ZW31 735 aaPredicted RBP6.31□□□□□ -1.4
TPM4-210ENST00000588507 ARCQ7LC44 396 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 ARHGEF19Q8IW93 802 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 RASGEF1CQ8N431 466 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 SVOPLQ8N434 492 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 ZDHHC22Q8N966 263 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 MAML1Q92585 1016 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 UCN3Q969E3 161 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 DHX58Q96C10 678 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 TIMP4Q99727 224 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 SLC39A3Q9BRY0 314 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 SUCNR1Q9BXA5 334 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 DEFB126Q9BYW3 111 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 SLC6A15Q9H2J7 730 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 ADAP2Q9NPF8 381 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 DDX28Q9NUL7 540 aaKnown RBP6.31□□□□□ -1.4
TPM4-210ENST00000588507 ELOVL5Q9NYP7 299 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.31□□□□□ -1.4
TPM4-210ENST00000588507 PCDHGB5Q9Y5G0 923 aa6.31□□□□□ -1.4
TPM4-210ENST00000588507 UBR4Q5T4S7 5183 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms