RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 NDUFS4O43181 175 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 OR1F1O43749 312 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 IPO13O94829 963 aaKnown RBP14.1□□□□□ -0.15
ATG4D-207ENST00000587256 ONECUT2O95948 504 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 UMODP07911 640 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 INHBAP08476 426 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 TFEBP19484 476 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 GMPRP36959 345 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 AVPR1BP47901 424 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 SERPINB8P50452 374 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 OR4D1Q15615 310 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 C18orf21Q32NC0 220 aaPredicted RBP14.1□□□□□ -0.15
ATG4D-207ENST00000587256 CATSPEREQ5SY80 951 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 TAOK1Q7L7X3 1001 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 PRICKLE2Q7Z3G6 844 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 PPP1R32Q7Z5V6 425 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 PRSS58Q8IYP2 241 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 TMEM102Q8N9M5 508 aaPredicted RBP14.1□□□□□ -0.15
ATG4D-207ENST00000587256 MFSD9Q8NBP5 474 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 SLC13A3Q8WWT9 602 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 MIEF2Q96C03 454 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 RHBDF1Q96CC6 855 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 UBXN10Q96LJ8 280 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 MACROD1Q9BQ69 325 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 CRB3Q9BUF7 120 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 ALG9Q9H6U8 611 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 CNOT10Q9H9A5 744 aaKnown RBP14.1□□□□□ -0.15
ATG4D-207ENST00000587256 PELI2Q9HAT8 420 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 SNX15Q9NRS6 342 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 TRPC4Q9UBN4 977 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 G3BP2Q9UN86 482 aaKnown RBP14.1□□□□□ -0.15
ATG4D-207ENST00000587256 TP53TG5Q9Y2B4 290 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 ACOT9Q9Y305 439 aa14.1□□□□□ -0.15
ATG4D-207ENST00000587256 MDC1Q14676 2089 aaKnown RBP14.1□□□□□ -0.15
ATG4D-207ENST00000587256 A0A087X1B8 175 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 TRBC2A0A5B9 178 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 SUPT3HB4E1H0 165 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 B8ZZF3 427 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 FFAR3O14843 346 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 GPR42O15529 346 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 SUPT3HO75486 399 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 IGHEP01854 428 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 SERPIND1P05546 499 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 LTA4HP09960 611 aaKnown RBP14.09□□□□□ -0.15
ATG4D-207ENST00000587256 GDF5P43026 501 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 SLC6A12P48065 614 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 CCL11P51671 97 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 REEP5Q00765 189 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 RBBP7Q16576 425 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 MED25Q71SY5 747 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 ZNF605Q86T29 641 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 TMEM151BQ8IW70 566 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 CLEC1AQ8NC01 280 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 UHMK1Q8TAS1 419 aaKnown RBP14.09□□□□□ -0.15
ATG4D-207ENST00000587256 STT3BQ8TCJ2 826 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 KCTD4Q8WVF5 259 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 KIAA1191Q96A73 305 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 PAFAH2Q99487 392 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 AIF1LQ9BQI0 150 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 TMEM79Q9BSE2 394 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 FUT8Q9BYC5 575 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 SPNS1Q9H2V7 528 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 NMRAL1Q9HBL8 299 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 P4HTMQ9NXG6 502 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 NUDT4Q9NZJ9 180 aa14.09□□□□□ -0.15
ATG4D-207ENST00000587256 MRPS2Q9Y399 296 aaKnown RBP14.09□□□□□ -0.15
ATG4D-207ENST00000587256 A0A087WUV0 522 aaPredicted RBP14.08□□□□□ -0.16
ATG4D-207ENST00000587256 FOXS1O43638 330 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 LCMT2O60294 686 aaKnown RBP14.08□□□□□ -0.16
ATG4D-207ENST00000587256 ZGLP1P0C6A0 271 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 IL1RNP18510 177 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 GNAZP19086 355 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 NR1D1P20393 614 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 MMP11P24347 488 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 VARSP26640 1264 aaKnown RBP14.08□□□□□ -0.16
ATG4D-207ENST00000587256 TYK2P29597 1187 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 SLC26A3P40879 764 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 HSPA7P48741 367 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 PGDP52209 483 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 IRF9Q00978 393 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 KLC1Q07866 573 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 RGS1Q08116 209 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 DLG1Q12959 904 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 CDC16Q13042 620 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 FAM53BQ14153 422 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 FBXO48Q5FWF7 155 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 CDKL4Q5MAI5 379 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 TEX35Q5T0J7 233 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 SULT1C3Q6IMI6 304 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 NXPE4Q6UWF7 544 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 CCDC91Q7Z6B0 441 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 PTRH1Q86Y79 214 aaKnown RBP14.08□□□□□ -0.16
ATG4D-207ENST00000587256 ARHGEF39Q8N4T4 335 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 AMER3Q8N944 861 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 SNX31Q8N9S9 440 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 PDPRQ8NCN5 879 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 LRRN4CLQ8ND94 238 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 ZNF740Q8NDX6 193 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 OR4K1Q8NGD4 311 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 OR9A4Q8NGU2 314 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms