RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 AIF1LQ9BQI0 150 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 RPP25Q9BUL9 199 aaKnown RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 DUSP26Q9BV47 211 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 SLC17A9Q9BYT1 436 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 TRIM8Q9BZR9 551 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 REXO4Q9GZR2 422 aaKnown RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 FAM192AQ9GZU8 254 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 OLAHQ9NV23 265 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 ATAD3AQ9NVI7 634 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 CLDND1Q9NY35 253 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 SLC25A37Q9NYZ2 338 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 ATP6V1HQ9UI12 483 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 ZFR2Q9UPR6 939 aaKnown RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 WBP11Q9Y2W2 641 aaKnown RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 GMEB1Q9Y692 573 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 AP1M2Q9Y6Q5 423 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 COL4A2P08572 1712 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 A0A1W2PQU0 124 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 DPPA5A6NC42 116 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 CLOCKO15516 846 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 SEMA3DO95025 777 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 RASAL1O95294 804 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 TNFAIP8O95379 198 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 PAK4O96013 591 aaPredicted RBP10.84□□□□□ -0.67
LIG3-204ENST00000585740 FAM58BPP0C7Q3 252 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 OXTRP30559 389 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 GSTM5P46439 218 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 WNT3P56703 355 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 RAE1P78406 368 aaKnown RBP10.84□□□□□ -0.67
LIG3-204ENST00000585740 ZNF763Q0D2J5 394 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 GRSF1Q12849 480 aaKnown RBP eCLIP10.84□□□□□ -0.67
LIG3-204ENST00000585740 TMEM196Q5HYL7 178 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 CATSPEREQ5SY80 951 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
LIG3-204ENST00000585740 DNAJC14Q6Y2X3 702 aaPredicted RBP10.84□□□□□ -0.67
LIG3-204ENST00000585740 GCNT7Q6ZNI0 430 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 IKBIPQ70UQ0 350 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 METTL4Q8N3J2 472 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 RNF175Q8N4F7 328 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 NATD1Q8N6N6 113 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 DENND6BQ8NEG7 585 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 OR5AR1Q8NGP9 310 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 OR14C36Q8NHC7 312 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 NUDT8Q8WV74 236 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 FIG4Q92562 907 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 DNASE1L2Q92874 299 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 COQ8BQ96D53 544 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 MSANTD3Q96H12 275 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 MSLNLQ96KJ4 702 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 EGLN2Q96KS0 407 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 RNF145Q96MT1 663 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 QRFPRQ96P65 431 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 PHF12Q96QT6 1004 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 PANX1Q96RD7 426 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 MYCBPQ99417 103 aaPredicted RBP10.84□□□□□ -0.67
LIG3-204ENST00000585740 CIB1Q99828 191 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 CHID1Q9BWS9 393 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 LGR4Q9BXB1 951 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 BHLHE41Q9C0J9 482 aaPredicted RBP10.84□□□□□ -0.67
LIG3-204ENST00000585740 RHBGQ9H310 441 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 CXorf56Q9H5V9 222 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 PIF1Q9H611 641 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 MVB12BQ9H7P6 319 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 MYNNQ9NPC7 610 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 WASH6PQ9NQA3 447 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 MBNL1Q9NR56 388 aaKnown RBP10.84□□□□□ -0.67
LIG3-204ENST00000585740 ZNF282Q9UDV7 671 aaPredicted RBP10.84□□□□□ -0.67
LIG3-204ENST00000585740 SLC23A2Q9UGH3 650 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 SERGEFQ9UGK8 458 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 LIMD1Q9UGP4 676 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 CIDEBQ9UHD4 219 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 PADI4Q9UM07 663 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 SLC17A4Q9Y2C5 497 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 TDRKHQ9Y2W6 561 aaKnown RBP10.84□□□□□ -0.67
LIG3-204ENST00000585740 HEBP2Q9Y5Z4 205 aa10.84□□□□□ -0.67
LIG3-204ENST00000585740 ATG2BQ96BY7 2078 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 DOCK9Q9BZ29 2069 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 BRWD1Q9NSI6 2320 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 RNF103-CHMP3A0A140T963 221 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 GNG14A0A1W2PPG7 69 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 ANTXRLA6NF34 631 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 SAC3D1A6NKF1 404 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 CLIC1O00299 241 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 RNASET2O00584 256 aaKnown RBP10.83□□□□□ -0.68
LIG3-204ENST00000585740 TPST1O60507 370 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 SCN2BO60939 215 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 CREG1O75629 220 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 ETHE1O95571 254 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 KLF8O95600 359 aaPredicted RBP10.83□□□□□ -0.68
LIG3-204ENST00000585740 IDSP22304 550 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 PTPN6P29350 595 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 GZMMP51124 257 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 CCR8P51685 355 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 CLCNKAP51800 687 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 ADPRHP54922 357 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 KIAA1024LP59773 190 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 REEP5Q00765 189 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 FGL2Q14314 439 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 ADRM1Q16186 407 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 NRF1Q16656 503 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms