RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ZFP1Q6P2D0 407 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 UNQ6494/PRO21346Q6UXR6 183 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 SLC36A4Q6YBV0 504 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 ABI3BPQ7Z7G0 1075 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 PIP4P1Q86T03 277 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 HPS6Q86YV9 775 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 LIX1Q8N485 282 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 SPDYE1Q8NFV5 336 aaPredicted RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 OR7G3Q8NG95 312 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 OR2L8Q8NGY9 312 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 LRRC58Q96CX6 371 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 ANKRD27Q96NW4 1050 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 INSM2Q96T92 566 aaPredicted RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 SH3GL1Q99961 368 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 AIF1LQ9BQI0 150 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 TMEM121BQ9BXQ6 578 aaPredicted RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 MUC13Q9H3R2 512 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 OSGEPL1Q9H4B0 414 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 KIR3DX1Q9H7L2 352 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 CARS2Q9HA77 564 aaKnown RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 CAPN10Q9HC96 672 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 CD93Q9NPY3 652 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 TM7SF3Q9NS93 570 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 AHSPQ9NZD4 102 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 STOML1Q9UBI4 398 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 SUCOQ9UBS9 1254 aaKnown RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 CD300AQ9UGN4 299 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 RALYQ9UKM9 306 aaKnown RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 SLC6A14Q9UN76 642 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 PSMD13Q9UNM6 376 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 WBP11Q9Y2W2 641 aaKnown RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 POLR3HQ9Y535 204 aaPredicted RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 PCYT1BQ9Y5K3 369 aaPredicted RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 DGKBQ9Y6T7 804 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 PKD1L2Q7Z442 2459 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 NBEAQ8NFP9 2946 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 ADAMTS9Q9P2N4 1935 aa10.01□□□□□ -0.81
LIG3-203ENST00000585370 ZFC3H1O60293 1989 aaKnown RBP10.01□□□□□ -0.81
LIG3-203ENST00000585370 PDZK1P1A8MUH7 402 aa10□□□□□ -0.81
LIG3-203ENST00000585370 BCAS2O75934 225 aaPredicted RBP10□□□□□ -0.81
LIG3-203ENST00000585370 PDE5AO76074 875 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CCNDBP1O95273 360 aa10□□□□□ -0.81
LIG3-203ENST00000585370 TNFP01375 233 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CFIP05156 583 aa10□□□□□ -0.81
LIG3-203ENST00000585370 HSD17B1P14061 328 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CD1EP15812 388 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CD22P20273 847 aa10□□□□□ -0.81
LIG3-203ENST00000585370 PTX3P26022 381 aaPredicted RBP10□□□□□ -0.81
LIG3-203ENST00000585370 RPL10P27635 214 aaKnown RBP10□□□□□ -0.81
LIG3-203ENST00000585370 GSTM2P28161 218 aa10□□□□□ -0.81
LIG3-203ENST00000585370 IL12AP29459 219 aa10□□□□□ -0.81
LIG3-203ENST00000585370 HOXD12P35452 270 aa10□□□□□ -0.81
LIG3-203ENST00000585370 DPP6P42658 865 aa10□□□□□ -0.81
LIG3-203ENST00000585370 RAB28P51157 221 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CCR8P51685 355 aa10□□□□□ -0.81
LIG3-203ENST00000585370 NEK2P51955 445 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CLDN2P57739 230 aa10□□□□□ -0.81
LIG3-203ENST00000585370 EEFSECP57772 596 aaKnown RBP10□□□□□ -0.81
LIG3-203ENST00000585370 SRP54P61011 504 aaKnown RBP10□□□□□ -0.81
LIG3-203ENST00000585370 ABATP80404 500 aa10□□□□□ -0.81
LIG3-203ENST00000585370 ACSM2AQ08AH3 577 aa10□□□□□ -0.81
LIG3-203ENST00000585370 BNIP2Q12982 314 aa10□□□□□ -0.81
LIG3-203ENST00000585370 NFYCQ13952 458 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CEACAM7Q14002 265 aa10□□□□□ -0.81
LIG3-203ENST00000585370 TRIM25Q14258 630 aaKnown RBP10□□□□□ -0.81
LIG3-203ENST00000585370 RPE65Q16518 533 aa10□□□□□ -0.81
LIG3-203ENST00000585370 ACSM2BQ68CK6 577 aa10□□□□□ -0.81
LIG3-203ENST00000585370 NOXRED1Q6NXP6 359 aa10□□□□□ -0.81
LIG3-203ENST00000585370 TMPRSS11BQ86T26 416 aa10□□□□□ -0.81
LIG3-203ENST00000585370 RETREG3Q86VR2 466 aa10□□□□□ -0.81
LIG3-203ENST00000585370 HID1Q8IV36 788 aa10□□□□□ -0.81
LIG3-203ENST00000585370 TBC1D19Q8N5T2 526 aa10□□□□□ -0.81
LIG3-203ENST00000585370 KDF1Q8NAX2 398 aaPredicted RBP10□□□□□ -0.81
LIG3-203ENST00000585370 TMEM145Q8NBT3 493 aa10□□□□□ -0.81
LIG3-203ENST00000585370 PPFIBP2Q8ND30 876 aa10□□□□□ -0.81
LIG3-203ENST00000585370 ABHD11Q8NFV4 315 aa10□□□□□ -0.81
LIG3-203ENST00000585370 TTLQ8NG68 377 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CEP76Q8TAP6 659 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CHTF18Q8WVB6 975 aa10□□□□□ -0.81
LIG3-203ENST00000585370 TESCQ96BS2 214 aa10□□□□□ -0.81
LIG3-203ENST00000585370 ASB9Q96DX5 294 aa10□□□□□ -0.81
LIG3-203ENST00000585370 TOE1Q96GM8 510 aaKnown RBP10□□□□□ -0.81
LIG3-203ENST00000585370 HBEGFQ99075 208 aa10□□□□□ -0.81
LIG3-203ENST00000585370 PRPF18Q99633 342 aaKnown RBP10□□□□□ -0.81
LIG3-203ENST00000585370 SCNM1Q9BWG6 230 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CLMPQ9H6B4 373 aa10□□□□□ -0.81
LIG3-203ENST00000585370 RMND5AQ9H871 391 aa10□□□□□ -0.81
LIG3-203ENST00000585370 FGF22Q9HCT0 170 aa10□□□□□ -0.81
LIG3-203ENST00000585370 FZD3Q9NPG1 666 aa10□□□□□ -0.81
LIG3-203ENST00000585370 GEMIN8Q9NWZ8 242 aaKnown RBP10□□□□□ -0.81
LIG3-203ENST00000585370 ABCD2Q9UBJ2 740 aa10□□□□□ -0.81
LIG3-203ENST00000585370 CYP8B1Q9UNU6 501 aa10□□□□□ -0.81
LIG3-203ENST00000585370 KCNK6Q9Y257 313 aa10□□□□□ -0.81
LIG3-203ENST00000585370 L3MBTL1Q9Y468 752 aa10□□□□□ -0.81
LIG3-203ENST00000585370 PCDHB11Q9Y5F2 797 aa10□□□□□ -0.81
LIG3-203ENST00000585370 ANKRD11Q6UB99 2663 aaPredicted RBP10□□□□□ -0.81
LIG3-203ENST00000585370 SPAARA0A1B0GVQ0 90 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 A0A1W2PPC4 97 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 OR5K4A6NMS3 321 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 KCNH1O95259 989 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms