RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 H0YIG0 161 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 P2RX6O15547 441 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 FOXS1O43638 330 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 NSA2O95478 260 aaKnown RBP11.76□□□□□ -0.53
SS18-225ENST00000585121 HPP00738 406 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 PGGT1BP53609 377 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 TAS2R39P59534 338 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 SLC6A19Q695T7 634 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 IGFL3Q6UXB1 125 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 C3orf62Q6ZUJ4 267 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 ADAMTSL2Q86TH1 951 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 ASPGQ86U10 573 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 TMEM151BQ8IW70 566 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 PARP9Q8IXQ6 854 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 RBMXL3Q8N7X1 1067 aaKnown RBP11.76□□□□□ -0.53
SS18-225ENST00000585121 OR11G2Q8NGC1 345 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 PYCR2Q96C36 320 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 CPNE1Q99829 537 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 ANKHQ9HCJ1 492 aa11.76□□□□□ -0.53
SS18-225ENST00000585121 UBR5O95071 2799 aaPredicted RBP11.75□□□□□ -0.53
SS18-225ENST00000585121 ANKRD12Q6UB98 2062 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 NSG1A0A0A6YYJ2 146 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 MASP2O00187 686 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 OR1F1O43749 312 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 STATHP02808 62 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 UQCRHP07919 91 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 SSTR1P30872 391 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 BCL6P41182 706 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 CD97P48960 835 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 HNMTP50135 292 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 AP2B1P63010 937 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 SKP1P63208 163 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 USP10Q14694 798 aaKnown RBP11.75□□□□□ -0.53
SS18-225ENST00000585121 CYS1Q717R9 158 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 NDUFAF7Q7L592 441 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 VN1R4Q7Z5H5 301 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 CCDC25Q86WR0 208 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 KBTBD2Q8IY47 623 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 AMER3Q8N944 861 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 MFSD9Q8NBP5 474 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 ABHD11Q8NFV4 315 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 OR9A4Q8NGU2 314 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 SLC5A11Q8WWX8 675 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 METTL21AQ8WXB1 218 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 THOC3Q96J01 351 aaKnown RBP11.75□□□□□ -0.53
SS18-225ENST00000585121 SLC29A3Q9BZD2 475 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 PHACTR1Q9C0D0 580 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 ILKAPQ9H0C8 392 aaPredicted RBP11.75□□□□□ -0.53
SS18-225ENST00000585121 EPS8L2Q9H6S3 715 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 SYNPO2LQ9H987 977 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 GRHL1Q9NZI5 618 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 MKL2Q9ULH7 1088 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 B3GNT3Q9Y2A9 372 aa11.75□□□□□ -0.53
SS18-225ENST00000585121 ASH1LQ9NR48 2969 aaKnown RBP11.74□□□□□ -0.53
SS18-225ENST00000585121 HEATR5BQ9P2D3 2071 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 TRBC2A0A5B9 178 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 NPEPPSL1A6NEC2 478 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 CDC7O00311 574 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 FFAR3O14843 346 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 GPR42O15529 346 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 LCMT2O60294 686 aaKnown RBP11.74□□□□□ -0.53
SS18-225ENST00000585121 ALOX12BO75342 701 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 SORBS2O94875 1100 aaKnown RBP11.74□□□□□ -0.53
SS18-225ENST00000585121 SERPIND1P05546 499 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 SPRP35270 261 aaPredicted RBP11.74□□□□□ -0.53
SS18-225ENST00000585121 GP5P40197 560 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 MAT1AQ00266 395 aaKnown RBP11.74□□□□□ -0.53
SS18-225ENST00000585121 CDKL1Q00532 357 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 RGS1Q08116 209 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 ZNF460Q14592 562 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 HERC3Q15034 1050 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 INPP5JQ15735 1006 aaPredicted RBP11.74□□□□□ -0.53
SS18-225ENST00000585121 MFSD4BQ5TF39 518 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 ATG9BQ674R7 924 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 FAAH2Q6GMR7 532 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 TMEM214Q6NUQ4 689 aaKnown RBP11.74□□□□□ -0.53
SS18-225ENST00000585121 NIPAL1Q6NVV3 410 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 SBSNQ6UWP8 590 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 TMEM207Q6UWW9 146 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 THOC6Q86W42 341 aaKnown RBP11.74□□□□□ -0.53
SS18-225ENST00000585121 CTAGE3PQ8IX95 158 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 IQCKQ8N0W5 287 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 ARHGEF39Q8N4T4 335 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 GALNT11Q8NCW6 608 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 C8orf44Q96CB5 159 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 TM4SF19Q96DZ7 209 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 AIF1LQ9BQI0 150 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 ZNF160Q9HCG1 818 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 RIC8BQ9NVN3 520 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 SH2B3Q9UQQ2 575 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 MTO1Q9Y2Z2 717 aaKnown RBP11.74□□□□□ -0.53
SS18-225ENST00000585121 OARD1Q9Y530 152 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 KCNE2Q9Y6J6 123 aa11.74□□□□□ -0.53
SS18-225ENST00000585121 CCDC88CQ9P219 2028 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 PRRC2CQ9Y520 2896 aaKnown RBP11.73□□□□□ -0.53
SS18-225ENST00000585121 TCRBV9S1A1TA0A576 114 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 URADA6NGE7 173 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 NDUFS4O43181 175 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 H2AFYO75367 372 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms