RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 FADS3Q9Y5Q0 445 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 PNMA8CA0A1B0GUJ8 204 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 FAM227AF5H4B4 570 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 H3BNX3 289 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 ERI3O43414 337 aaKnown RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 RB1P06400 928 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 DGCR6Q14129 220 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 ERV3-1Q14264 604 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 PRPF38BQ5VTL8 546 aaKnown RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 PRAMEF13Q5VWM6 474 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 FAM46CQ5VWP2 391 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 PNCKQ6P2M8 343 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 SGCDQ92629 289 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 C6orf106Q9H6K1 298 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 EHD3Q9NZN3 535 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 SORCS3Q9UPU3 1222 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 PATJQ8NI35 1801 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 GNB5O14775 395 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 SPINT1O43278 529 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 FKBP6O75344 327 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 EEDO75530 441 aaKnown RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 IL3P08700 152 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 PIM1P11309 404 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 ALOX15P16050 662 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 JAK1P23458 1154 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 FASP25445 335 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 MTHFRP42898 656 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 GRSF1Q12849 480 aaKnown RBP eCLIP9.91□□□□□ -0.82
RFFL-212ENST00000584655 CLCA4Q14CN2 919 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 ACBD5Q5T8D3 534 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 CPTPQ5TA50 214 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 ETFBKMTQ8IXQ9 262 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 OR2T34Q8NGX1 318 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 OR2T3Q8NH03 318 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 PHOSPHO2Q8TCD6 241 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 NETO1Q8TDF5 533 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 MRPL38Q96DV4 380 aaKnown RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 MCCC1Q96RQ3 725 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 SLC12A9Q9BXP2 914 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 CPEB1Q9BZB8 566 aaKnown RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 ZCCHC2Q9C0B9 1178 aaKnown RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 ZFR2Q9UPR6 939 aaKnown RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 YY2O15391 372 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 SERPINI2O75830 405 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 IL1RNP18510 177 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 MAGP20916 626 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 NTSR1P30989 418 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 TAP2Q03519 686 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 HIST2H2ACQ16777 129 aaPredicted RBP9.9□□□□□ -0.82
RFFL-212ENST00000584655 LDLRAP1Q5SW96 308 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 KHDRBS2Q5VWX1 349 aaKnown RBP9.9□□□□□ -0.82
RFFL-212ENST00000584655 HIST2H2AA3Q6FI13 130 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 CHSY3Q70JA7 882 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 NLGN4XQ8N0W4 816 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 CCDC138Q96M89 665 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 SIKE1Q9BRV8 207 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 DPH7Q9BTV6 452 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 DGCR6LQ9BY27 220 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 WARS2Q9UGM6 360 aaKnown RBP9.9□□□□□ -0.82
RFFL-212ENST00000584655 ANAPC2Q9UJX6 822 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 C15orf38-AP3S2A0A0A6YYH1 394 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 C7orf72A4D263 438 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 STX16O14662 325 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 C1orf105O95561 183 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 LYNP07948 512 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 HOXB8P17481 243 aaPredicted RBP9.9□□□□□ -0.82
RFFL-212ENST00000584655 DEFB134Q4QY38 66 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 MED27Q6P2C8 311 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 TMIGD1Q6UXZ0 262 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 ARPINQ7Z6K5 226 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 CCDC116Q8IYX3 515 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 GHDCQ8N2G8 530 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 ATG16L2Q8NAA4 619 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 OR5D16Q8NGK9 328 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 MAGEC3Q8TD91 643 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 KAT2AQ92830 837 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 UBE2FQ969M7 185 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 PHPT1Q9NRX4 125 aaPredicted RBP9.9□□□□□ -0.82
RFFL-212ENST00000584655 NDOR1Q9UHB4 597 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 LRCH1Q9Y2L9 728 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 RWDD3Q9Y3V2 267 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 ANAPC1Q9H1A4 1944 aa9.9□□□□□ -0.82
RFFL-212ENST00000584655 CLIC1O00299 241 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 CACNB4O00305 520 aaPredicted RBP9.9□□□□□ -0.83
RFFL-212ENST00000584655 LCMT2O60294 686 aaKnown RBP9.9□□□□□ -0.83
RFFL-212ENST00000584655 GSTT1P30711 240 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 SUOXP51687 545 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 MANFP55145 182 aaKnown RBP9.9□□□□□ -0.83
RFFL-212ENST00000584655 PGM2L1Q6PCE3 622 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 TBPL2Q6SJ96 375 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 UTS2BQ765I0 119 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 COMMD6Q7Z4G1 85 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 KBTBD6Q86V97 674 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 ST13P4Q8IZP2 240 aaPredicted RBP9.9□□□□□ -0.83
RFFL-212ENST00000584655 OR9A1PQ8NGU1 263 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 UTP15Q8TED0 518 aaKnown RBP9.9□□□□□ -0.83
RFFL-212ENST00000584655 KLHL31Q9H511 634 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 TBC1D29Q9UFV1 150 aa9.9□□□□□ -0.83
RFFL-212ENST00000584655 POLEQ07864 2286 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 H7C0S8 307 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms