RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PRKACGP22612 351 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 LHCGRP22888 699 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 HTR1EP28566 365 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 PSMD8P48556 350 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 ILF3Q12906 894 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■■■■□ 19.3
RNF43-208ENST00000584437 HNRNPA0Q13151 305 aaKnown RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 PON3Q15166 354 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 ZNF678Q5SXM1 525 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 NPAS3Q8IXF0 933 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 CMTR2Q8IYT2 770 aaKnown RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 ACDQ96AP0 544 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 WRAP53Q9BUR4 548 aaKnown RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 MRPS30Q9NP92 439 aaKnown RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 ERVK-11Q9UQG0 969 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 DISC1C4P0D8 188 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 SLURP2P0DP57 97 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 MATN1P21941 496 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 AHCYP23526 432 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 MAP2K3P46734 347 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ARF3P61204 181 aaPredicted RBP12.68□□□□□ -0.38
RNF43-208ENST00000584437 ARF1P84077 181 aaKnown RBP12.68□□□□□ -0.38
RNF43-208ENST00000584437 CYBRD1Q53TN4 286 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ATG9BQ674R7 924 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 FAM129CQ86XR2 697 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ANKRD13BQ86YJ7 626 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 OR2L8Q8NGY9 312 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ZCCHC10Q8TBK6 192 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ADAD1Q96M93 576 aaKnown RBP12.68□□□□□ -0.38
RNF43-208ENST00000584437 ZNF717Q9BY31 904 aaPredicted RBP12.68□□□□□ -0.38
RNF43-208ENST00000584437 MAGED1Q9Y5V3 778 aaPredicted RBP12.68□□□□□ -0.38
RNF43-208ENST00000584437 IGKV6D-41A0A0C4DH26 115 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 AFF1P51825 1210 aaKnown RBP12.68□□□□□ -0.38
RNF43-208ENST00000584437 E2F1Q01094 437 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 TRAM1Q15629 374 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 SPANXN4Q5MJ08 99 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 TMEM236Q5W0B7 351 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 DNM1P34Q6PK57 102 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 MCEMP1Q8IX19 187 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 PROKR2Q8NFJ6 384 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 OR5J2Q8NH18 312 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ZSCAN5AQ9BUG6 496 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ACTR6Q9GZN1 396 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 TMEM168Q9H0V1 697 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 RIPK3Q9Y572 518 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 J3QLW9 94 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 NUAK1O60285 661 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 RFPL1O75677 317 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 CSF2P04141 144 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ZNF19P17023 458 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 VAMP1P23763 118 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ELK4P28324 431 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 NRIP1P48552 1158 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 S100A12P80511 92 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 KCNC4Q03721 635 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 SLC8B1Q6J4K2 584 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 SHQ1Q6PI26 577 aaKnown RBP12.68□□□□□ -0.38
RNF43-208ENST00000584437 CLEC20AQ6ZU45 233 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ELMOD2Q8IZ81 293 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 OSTF1Q92882 214 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ZNF700Q9H0M5 742 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ADAP2Q9NPF8 381 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 COPS7AQ9UBW8 275 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ADAMTS6Q9UKP5 1117 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 IFT52Q9Y366 437 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 PSMD9O00233 223 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 NRLP54845 237 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ANKFN1Q8N957 763 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 CLEC4DQ8WXI8 215 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 RHBDF1Q96CC6 855 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 TAS2R9Q9NYW1 312 aa12.68□□□□□ -0.38
RNF43-208ENST00000584437 ARL5CA6NH57 179 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 FLRT2O43155 660 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 OR2B3O76000 313 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 SNAP29O95721 258 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 CSN2P05814 226 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 SYPL2Q5VXT5 272 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 BAIAP2L2Q6UXY1 529 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 TMCO2Q7Z6W1 182 aaPredicted RBP12.67□□□□□ -0.38
RNF43-208ENST00000584437 ZNF366Q8N895 744 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 C2CD4AQ8NCU7 369 aaPredicted RBP12.67□□□□□ -0.38
RNF43-208ENST00000584437 CD180Q99467 661 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 BCL7BQ9BQE9 202 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 TSSK6Q9BXA6 273 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 SMURF1Q9HCE7 757 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 ZDHHC4Q9NPG8 344 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 PIGVQ9NUD9 493 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 FBXL21Q9UKT6 434 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 NR2E3Q9Y5X4 410 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 CDC7O00311 574 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 PRMT3O60678 531 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 CLIC3O95833 236 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 FUT4P22083 530 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 BMP8BP34820 402 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 CASP9P55211 416 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 GALNT2Q10471 571 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 ST3GAL4Q11206 333 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 CEACAM20Q6UY09 585 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 HACD2Q6Y1H2 254 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 BMP8AQ7Z5Y6 402 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 AMZ2Q86W34 360 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms