RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 HAUS8Q9BT25 410 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 MCMBPQ9BTE3 642 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 TGIF2Q9GZN2 237 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 MKKSQ9NPJ1 570 aaPredicted RBP20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 NSMCE4AQ9NXX6 385 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 NPEPPSL1A6NEC2 478 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 CXorf49A8MYA2 514 aaPredicted RBP20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 AVPR1BP47901 424 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 MEF2AQ02078 507 aaPredicted RBP20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 INPP5JQ15735 1006 aaPredicted RBP20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 FAAH2Q6GMR7 532 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 ZC3H7AQ8IWR0 971 aaKnown RBP20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 SHISA5Q8N114 240 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 NKAPQ8N5F7 415 aaKnown RBP20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 ABHD11Q8NFV4 315 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 ANKRD49Q8WVL7 239 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 ATL1Q8WXF7 558 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 TM4SF19Q96DZ7 209 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 VPS39Q96JC1 886 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 VPS50Q96JG6 964 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 RHOJQ9H4E5 214 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 ZNF160Q9HCG1 818 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 B3GNT3Q9Y2A9 372 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 NBASA2RRP1 2371 aa20.35■□□□□ 0.85
PPP4R1-228ENST00000584074 HEATR5BQ9P2D3 2071 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 MAP2K7O14733 419 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 EIF3HO15372 352 aaKnown RBP eCLIP20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 HEXBP07686 556 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 GRK3P35626 688 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 CCR8P51685 355 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 TMEM214Q6NUQ4 689 aaKnown RBP20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 ASPGQ86U10 573 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 KCT2Q8NC54 265 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 CAMKVQ8NCB2 501 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 OR4K1Q8NGD4 311 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 SLC13A3Q8WWT9 602 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 THOC3Q96J01 351 aaKnown RBP20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 LHPPQ9H008 270 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 C14orf105Q9NVL8 296 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 NOVA2Q9UNW9 492 aaKnown RBP20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 MTO1Q9Y2Z2 717 aaKnown RBP20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 ANKRD12Q6UB98 2062 aa20.34■□□□□ 0.85
PPP4R1-228ENST00000584074 TCRBV9S1A1TA0A576 114 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 VPS4BO75351 444 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 NSA2O95478 260 aaKnown RBP20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 HPP00738 406 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 COX6A1P12074 109 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 IL1RNP18510 177 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 UQCRFS1P47985 274 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 EFNA3P52797 238 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 PLTPP55058 493 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 EEF1A2Q05639 463 aaKnown RBP20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 TRADDQ15628 312 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 CATSPEREQ5SY80 951 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 AGAP7PQ5VUJ5 663 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 IRAK1BP1Q5VVH5 260 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 ZADH2Q8N4Q0 377 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 MFSD9Q8NBP5 474 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 ZCCHC10Q8TBK6 192 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 ANKRD7Q92527 254 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 TM9SF4Q92544 642 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 TSNARE1Q96NA8 513 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 AGAP4Q96P64 663 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 GPAMQ9HCL2 828 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 VPS4AQ9UN37 437 aa20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 UTP11Q9Y3A2 253 aaKnown RBP20.33■□□□□ 0.85
PPP4R1-228ENST00000584074 HECTD1Q9ULT8 2610 aa20.33■□□□□ 0.84
PPP4R1-228ENST00000584074 H0YIG0 161 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 SGK494L7N484 410 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 OR1F1O43749 312 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 JRKO75564 520 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 BMP10O95393 424 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 SRSF1Q07955 248 aaKnown RBP eCLIP20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 TSNQ15631 228 aaKnown RBP20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 C3orf62Q6ZUJ4 267 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 NDUFAF7Q7L592 441 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 GALNT11Q8NCW6 608 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 ZNF740Q8NDX6 193 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 NEIL2Q969S2 332 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 MOCOSQ96EN8 888 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 UNKQ9C0B0 810 aaKnown RBP20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 ILKAPQ9H0C8 392 aaPredicted RBP20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 CAB39LQ9H9S4 337 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 HCN3Q9P1Z3 774 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 MAP10Q9P2G4 905 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 MKL2Q9ULH7 1088 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 CSAG2Q9Y5P2 127 aa20.32■□□□□ 0.84
PPP4R1-228ENST00000584074 MDC1Q14676 2089 aaKnown RBP20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 NUP210LQ5VU65 1888 aa20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 NSG1A0A0A6YYJ2 146 aa20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 CLEC18AA5D8T8 446 aa20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 SLC35G6P0C7Q6 338 aa20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 GNLYP22749 145 aa20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 CXCR2P25025 360 aa20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 SLC12A2P55011 1212 aa20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 GPX6P59796 221 aa20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 UBAP2LQ14157 1087 aaKnown RBP20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 CSHL1Q14406 222 aa20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 ZDHHC24Q6UX98 284 aa20.31■□□□□ 0.84
PPP4R1-228ENST00000584074 CLEC18BQ6UXF7 455 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms