RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ELOVL5	Q9NYP7	299 aa		4.51	□□□□□ -1.69
MSI2-216	ENST00000582772	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.51	□□□□□ -1.69
MSI2-216	ENST00000582772	CD84	Q9UIB8	345 aa		4.51	□□□□□ -1.69
MSI2-216	ENST00000582772	PPIL1	Q9Y3C6	166 aa		4.51	□□□□□ -1.69
MSI2-216	ENST00000582772	RNF115	Q9Y4L5	304 aa		4.51	□□□□□ -1.69
MSI2-216	ENST00000582772	PCDHA3	Q9Y5H8	950 aa		4.51	□□□□□ -1.69
MSI2-216	ENST00000582772		V9GYY5	206 aa	Predicted RBP	4.51	□□□□□ -1.69
MSI2-216	ENST00000582772	VPS13D	Q5THJ4	4388 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772		A0A0U1RQJ8	604 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	HMX2	A2RU54	273 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	FADS2P1	A8MWK0	482 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	C2orf74	A8MZ97	194 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CFAP99	D6REC4	459 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	C16orf97	H3BN30	126 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	PIK3R2	O00459	728 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CBFA2T2	O43439	604 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CLPX	O76031	633 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	SEC24D	O94855	1032 aa	Predicted RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	RCBTB2	O95199	551 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	HEXB	P07686	556 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CELA3A	P09093	270 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CSF1	P09603	554 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	C8orf89	P0DMQ9	161 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	VCL	P18206	1134 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	NTF4	P34130	210 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	USP8	P40818	1118 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	EFNA4	P52798	201 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	STX17	P56962	302 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	TAS2R50	P59544	299 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	SNRPF	P62306	86 aa	Known RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	TPM4	P67936	248 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CBX1	P83916	185 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CDK17	Q00537	523 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	BCL2L1	Q07817	233 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	MAMLD1	Q13495	774 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	GRM7	Q14831	915 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	RBMY1F	Q15415	496 aa	Known RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	ZRSR1	Q15695	479 aa	Known RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	TTC38	Q5R3I4	469 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CDKAL1	Q5VV42	579 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	FOXB2	Q5VYV0	432 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	SAXO2	Q658L1	398 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	DENND2C	Q68D51	928 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	PLXDC2	Q6UX71	529 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	GK5	Q6ZS86	529 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	C1orf229	Q6ZS94	237 aa	Predicted RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	RFLNA	Q6ZTI6	216 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	DOK3	Q7L591	496 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	MDGA2	Q7Z553	956 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	C1QL2	Q7Z5L3	287 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	GLCCI1	Q86VQ1	547 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	PRSS58	Q8IYP2	241 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	PM20D2	Q8IYS1	436 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	EMC1	Q8N766	993 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	TC2N	Q8N9U0	490 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	MLKL	Q8NB16	471 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	ZNF540	Q8NDQ6	660 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	PSD4	Q8NDX1	1056 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772		Q8NFD4	153 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	FBXO30	Q8TB52	745 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	FAM71B	Q8TC56	605 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	ELP5	Q8TE02	316 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	UCN3	Q969E3	161 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	SMARCE1	Q969G3	411 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	SLC25A28	Q96A46	364 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	DHX58	Q96C10	678 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CDK5RAP3	Q96JB5	506 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	RIOK2	Q9BVS4	552 aa	Known RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	C1QTNF5	Q9BXJ0	243 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	NAA15	Q9BXJ9	866 aa	Known RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CACNG6	Q9BXT2	260 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CDCP1	Q9H5V8	836 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	C12orf49	Q9H741	205 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	TRIM39	Q9HCM9	518 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	ADAP2	Q9NPF8	381 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	TMEM51	Q9NW97	253 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	GRID1	Q9ULK0	1009 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	CAPN11	Q9UMQ6	739 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	KLK4	Q9Y5K2	254 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	ARFGEF3	Q5TH69	2177 aa		4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	APOB	P04114	4563 aa	Known RBP	4.5	□□□□□ -1.69
MSI2-216	ENST00000582772	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772		A0A1B0GTH6	734 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	BTN3A3	O00478	584 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	BTN3A1	O00481	513 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	NDC80	O14777	642 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	XPNPEP2	O43895	674 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	RAMP2	O60895	175 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	TNFSF13	O75888	250 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	SLU7	O95391	586 aa	Known RBP	4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	NGF	P01138	241 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	HLA-DRA	P01903	254 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	FES	P07332	822 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	NDUFS1	P28331	727 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	PRKCI	P41743	596 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	RGR	P47804	291 aa		4.49	□□□□□ -1.69
MSI2-216	ENST00000582772	PDLIM4	P50479	330 aa		4.49	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms