RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ANKRD46Q86W74 232 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 SNX32Q86XE0 403 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 MEX3DQ86XN8 651 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 LACC1Q8IV20 430 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 APLFQ8IW19 511 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 OR4C15Q8NGM1 316 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 OR1L3Q8NH93 324 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 APOBEC4Q8WW27 367 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 ARHGAP45Q92619 1136 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 TEKT1Q969V4 418 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 CENPTQ96BT3 561 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 RBM41Q96IZ5 413 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 NECTIN4Q96NY8 510 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 BTBD9Q96Q07 612 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 CDCA3Q99618 268 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 SRD5A3Q9H8P0 318 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 RAVER2Q9HCJ3 691 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 LEF1Q9UJU2 399 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 LIPT1Q9Y234 373 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 SDR42E2A6NKP2 422 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 H3BMM5 538 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 SLC33A1O00400 549 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF263O14978 683 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 PAK4O96013 591 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 EEF2P13639 858 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 PIK3R1P27986 724 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 GLIPR1P48060 266 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 GNB1P62873 340 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 ASIC1P78348 528 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 HNRNPDQ14103 355 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 RCN2Q14257 317 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 TEAD2Q15562 447 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 SMU1Q2TAY7 513 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF542PQ5EBM4 170 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 OR4C11Q6IEV9 310 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 SLC25A47Q6Q0C1 308 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 BTN2A1Q7KYR7 527 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 PTAR1Q7Z6K3 402 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 CLYBLQ8N0X4 340 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 GBP7Q8N8V2 638 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 KIAA0895Q8NCT3 520 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 TMEM190Q8WZ59 177 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 LPAR4Q99677 370 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 PI4K2AQ9BTU6 479 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 DNAJC17Q9NVM6 304 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 SLCO1C1Q9NYB5 712 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 CNIH4Q9P003 139 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 FBXL5Q9UKA1 691 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 PA2G4Q9UQ80 394 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 ACEP12821 1306 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 DISP3Q9P2K9 1392 aa4.13□□□□□ -1.75
SMCHD1-205ENST00000581383 A0A087WW49 117 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 TRBV4-1A0A0J9YWV2 114 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 NPIPA3F8WFD2 350 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF195O14628 629 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 CRCPO75575 148 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 SLC16A8O95907 504 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 GH1P01241 217 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 CFC1BP0CG36 223 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 CFC1P0CG37 223 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 SLC2A2P11168 524 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 CD59P13987 128 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 CYP2A7P20853 494 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 OR3A1P47881 315 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 CRIP2P52943 208 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 ATP12AP54707 1039 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 ABRQ12979 859 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 TRIM29Q14134 588 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF74Q16587 644 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 GLRA4Q5JXX5 417 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 ARHGAP17Q68EM7 881 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 PSRC1Q6PGN9 363 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 NHLRC1Q6VVB1 395 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 SLC24A5Q71RS6 500 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 CPEB2Q7Z5Q1 589 aaKnown RBP4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 GPR141Q7Z602 305 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 CCDC60Q8IWA6 550 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 FAM76AQ8TAV0 307 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 PTP4A1Q93096 173 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 NXPE2Q96DL1 559 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 NKX3-1Q99801 234 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 ATG101Q9BSB4 218 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 ALKBH7Q9BT30 221 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 CACNG6Q9BXT2 260 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 PITPNM3Q9BZ71 974 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 RSPH9Q9H1X1 276 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 P2RY12Q9H244 342 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 EGLN3Q9H6Z9 239 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 C10orf88Q9H8K7 445 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 PDRG1Q9NUG6 133 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 TMEM161AQ9NX61 479 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 NOCTQ9UK39 431 aaKnown RBP4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 PRDM4Q9UKN5 801 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 GPR132Q9UNW8 380 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 AGTPBP1Q9UPW5 1226 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 GAB2Q9UQC2 676 aa4.12□□□□□ -1.75
SMCHD1-205ENST00000581383 ILVBLA1L0T0 632 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 LRRD1A4D1F6 860 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 MTMR11A4FU01 709 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms