RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 ZC3H7AQ8IWR0 971 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 SHISA5Q8N114 240 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 PPP4R1Q8TF05 950 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 LRRC39Q96DD0 335 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 HIST1H2AHQ96KK5 128 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 OLFM1Q99784 485 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 HIST1H2AJQ99878 128 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 H2AFJQ9BTM1 129 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 SGPP1Q9BX95 441 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 TRIM31Q9BZY9 425 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 TP73O15350 636 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 LCMT2O60294 686 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 SEC31AO94979 1220 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 GP1BBP13224 206 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 FDXRP22570 491 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 EFNA3P52797 238 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 LCTLQ6UWM7 567 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 ISLR2Q6UXK2 745 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 KBTBD2Q8IY47 623 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 AMER2Q8N7J2 671 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 PYCR2Q96C36 320 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 TM4SF19Q96DZ7 209 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 SNF8Q96H20 258 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 CNDP1Q96KN2 507 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 EPS8L2Q9H6S3 715 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 ARL15Q9NXU5 204 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 MKL2Q9ULH7 1088 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 PYCARDQ9ULZ3 195 aa20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 NOVA2Q9UNW9 492 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-215ENST00000580784 SCN2AQ99250 2005 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 IGHV1-45A0A0A0MS14 117 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 JRKO75564 520 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 BMP10O95393 424 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 PRR35P0CG20 571 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 CDH1P12830 882 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 CCND1P24385 295 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 BCL6P41182 706 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 ARL4CP56559 192 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 FAM45BPQ6NSW5 357 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 CATSPER1Q8NEC5 780 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 FAM45AQ8TCE6 357 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 PSMF1Q92530 271 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 THAP11Q96EK4 314 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 PDLIM2Q96JY6 352 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 LMF1Q96S06 567 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 BARD1Q99728 777 aaKnown RBP20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 IKZF3Q9UKT9 509 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 CORO1CQ9ULV4 474 aaPredicted RBP20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 PSAT1Q9Y617 370 aa20.17■□□□□ 0.82
CSNK1D-215ENST00000580784 A0A1W2PQ72 361 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 H0YIG0 161 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 CCDC188H7C350 402 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 FANCGO15287 622 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 NSA2O95478 260 aaKnown RBP20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 GUCA1CO95843 209 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 CELA2AP08217 269 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 IL1RNP18510 177 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 PAFAH1B1P43034 410 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 PDIA2Q13087 525 aaKnown RBP20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 MFAP5Q13361 173 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 FASTKD3Q14CZ7 662 aaKnown RBP20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 DUPD1Q68J44 220 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 CAPN13Q6MZZ7 669 aaPredicted RBP20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 TMEM214Q6NUQ4 689 aaKnown RBP20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 TMEM205Q6UW68 189 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 TMEM207Q6UWW9 146 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 SLC26A11Q86WA9 606 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 KCT2Q8NC54 265 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 CAMKVQ8NCB2 501 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 SSC4DQ8WTU2 575 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 SLC13A3Q8WWT9 602 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 TRIM54Q9BYV2 358 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 PTGFRNQ9P2B2 879 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 SVILO95425 2214 aa20.16■□□□□ 0.82
CSNK1D-215ENST00000580784 LOC102723996A0A087X1L8 192 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 EFCAB8A8MWE9 144 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 SGK494L7N484 410 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 SERPINA7P05543 415 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 RNF224P0DH78 156 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 SAT1P21673 171 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 RPL21P46778 160 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 AP1S2P56377 157 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 MRPS25P82663 173 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 MEF2AQ02078 507 aaPredicted RBP20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 FRG1Q14331 258 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 ZNF169Q14929 603 aaPredicted RBP20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 ASPGQ86U10 573 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 SIRT6Q8N6T7 355 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 FBXO36Q8NEA4 188 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 OR56A3Q8NH54 315 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 OR51Q1Q8NH59 317 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 ZCCHC10Q8TBK6 192 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 BRIX1Q8TDN6 353 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 ANP32BQ92688 251 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 OR4K3Q96R72 315 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 KRT12Q99456 494 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 HAUS8Q9BT25 410 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 ZNF700Q9H0M5 742 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 HCN3Q9P1Z3 774 aa20.15■□□□□ 0.82
CSNK1D-215ENST00000580784 ZFATQ9P243 1243 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms