RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 DRD4P21917 467 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 GABRA4P48169 554 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 AGTR2P50052 363 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 ERVPABLB-1P60509 514 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 CLCQ05315 142 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 DEFB110Q30KQ9 67 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 FBXO48Q5FWF7 155 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 ARL13AQ5H913 290 aaPredicted RBP14.86□□□□□ -0.03
SS18-216ENST00000580751 ZCCHC23Q6ZST2 131 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 RNF44Q7L0R7 432 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 WDR75Q8IWA0 830 aaKnown RBP14.86□□□□□ -0.03
SS18-216ENST00000580751 GPR135Q8IZ08 494 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 TBC1D19Q8N5T2 526 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 SNX31Q8N9S9 440 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 PIWIL2Q8TC59 973 aaKnown RBP14.86□□□□□ -0.03
SS18-216ENST00000580751 GATA6Q92908 595 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 ESAMQ96AP7 390 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 PRAP1Q96NZ9 151 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 CCT8L2Q96SF2 557 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 CTRCQ99895 268 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 TRIM55Q9BYV6 548 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 PELI2Q9HAT8 420 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 APMAPQ9HDC9 416 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 VTI1BQ9UEU0 232 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 SERTAD3Q9UJW9 196 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 ANGPTL3Q9Y5C1 460 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 B3GALT1Q9Y5Z6 326 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 ACACBO00763 2458 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 APC2O95996 2303 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 FREM2Q5SZK8 3169 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 C9orf172C9J069 976 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 CLGNO14967 610 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 SRPX2O60687 465 aaPredicted RBP14.85□□□□□ -0.03
SS18-216ENST00000580751 CTSVO60911 334 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 OTCP00480 354 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 EPB42P16452 691 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 CD82P27701 267 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 SEC24CP53992 1094 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 ITGA1P56199 1179 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 RPS15AP62244 130 aaKnown RBP14.85□□□□□ -0.03
SS18-216ENST00000580751 CSNK1G2P78368 415 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 TCTE1Q5JU00 501 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 NXPE4Q6UWF7 544 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 TMPRSS11BQ86T26 416 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 MCATQ8IVS2 390 aaKnown RBP14.85□□□□□ -0.03
SS18-216ENST00000580751 PMEPA1Q969W9 287 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 ZNF382Q96SR6 550 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 SORT1Q99523 831 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 CCT7Q99832 543 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 EHD1Q9H4M9 534 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 SLCO1B3Q9NPD5 702 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 PFDN4Q9NQP4 134 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 FGFR1OP2Q9NVK5 253 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 IRAK4Q9NWZ3 460 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 DKK4Q9UBT3 224 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 PILRAQ9UKJ1 303 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 ASB1Q9Y576 335 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 ASPMQ8IZT6 3477 aa14.85□□□□□ -0.03
SS18-216ENST00000580751 ACACAQ13085 2346 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 WDFY3Q8IZQ1 3526 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 FRYQ5TBA9 3013 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 A0A0J9YVX5 310 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 E7EQ34 232 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 HAT1O14929 419 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 NRP2O60462 931 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 UGDHO60701 494 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 OR2B3O76000 313 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 SIX3O95343 332 aaPredicted RBP14.84□□□□□ -0.03
SS18-216ENST00000580751 ESRRBO95718 433 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 SLC5A2P31639 672 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 RPL14P50914 215 aaKnown RBP14.84□□□□□ -0.03
SS18-216ENST00000580751 CYP4F3Q08477 520 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 GTF2H2Q13888 395 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 TBC1D25Q3MII6 688 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 CATSPEREQ5SY80 951 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 GKAP1Q5VSY0 366 aaPredicted RBP14.84□□□□□ -0.03
SS18-216ENST00000580751 CES4AQ5XG92 561 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 GTF2H2CQ6P1K8 395 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 PIGWQ7Z7B1 504 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 OR4K1Q8NGD4 311 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 OR1L3Q8NH93 324 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 RERGQ96A58 199 aaPredicted RBP14.84□□□□□ -0.03
SS18-216ENST00000580751 THAP11Q96EK4 314 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 AIF1LQ9BQI0 150 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 NTMT1Q9BV86 223 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 TMEM121BQ9BXQ6 578 aaPredicted RBP14.84□□□□□ -0.03
SS18-216ENST00000580751 CCDC86Q9H6F5 360 aaKnown RBP14.84□□□□□ -0.03
SS18-216ENST00000580751 FOXJ2Q9P0K8 574 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 KLHL14Q9P2G3 628 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 ACSL6Q9UKU0 697 aa14.84□□□□□ -0.03
SS18-216ENST00000580751 TPRP12270 2363 aaKnown RBP14.84□□□□□ -0.03
SS18-216ENST00000580751 ANKRD11Q6UB99 2663 aaPredicted RBP14.83□□□□□ -0.03
SS18-216ENST00000580751 KCNE1BA0A087WTH5 132 aa14.83□□□□□ -0.04
SS18-216ENST00000580751 TRBC2A0A5B9 178 aa14.83□□□□□ -0.04
SS18-216ENST00000580751 ZSCAN9O15535 394 aaPredicted RBP14.83□□□□□ -0.04
SS18-216ENST00000580751 HCRTR1O43613 425 aa14.83□□□□□ -0.04
SS18-216ENST00000580751 ITM2AO43736 263 aa14.83□□□□□ -0.04
SS18-216ENST00000580751 SCRG1O75711 98 aa14.83□□□□□ -0.04
SS18-216ENST00000580751 ENO1P06733 434 aaKnown RBP14.83□□□□□ -0.04
SS18-216ENST00000580751 ALOX15P16050 662 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms