RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 VRK3Q8IV63 474 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 CCDC116Q8IYX3 515 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 SLC5A8Q8N695 610 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 IPMKQ8NFU5 416 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 OR2L3Q8NG85 312 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 LINC01560Q8TB33 94 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 METTL21AQ8WXB1 218 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 ELMO1Q92556 727 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 RAPGEF5Q92565 580 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 SLC22A18Q96BI1 424 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 CALR3Q96L12 384 aaKnown RBP7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 ZNF830Q96NB3 372 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 PIP5K1AQ99755 562 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 MIPEPQ99797 713 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 GORASP1Q9BQQ3 440 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 ATG10Q9H0Y0 220 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 ISCUQ9H1K1 167 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 VPS37BQ9H9H4 285 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 DEPPQ9NTK1 212 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 IP6K2Q9UHH9 426 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 ANAPC7Q9UJX3 599 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 KLF13Q9Y2Y9 288 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 LIPGQ9Y5X9 500 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 RAI1Q7Z5J4 1906 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 CR1P17927 2039 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 SCN3AQ9NY46 2000 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 A0A1W2PPV9 198 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 OR2A25A4D2G3 310 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 MBD3L4A6NDZ8 208 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 MBD3L5A6NJ08 208 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 SOWAHDA6NJG2 315 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 C3orf70A6NLC5 250 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 KLRC4-KLRK1H3BQV0 150 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 CDK2AP1O14519 115 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 NDC80O14777 642 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 P2RX6O15547 441 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 KCNAB3O43448 404 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 SMPD2O60906 423 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 FKBP9O95302 570 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 ANXA5P08758 320 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 NID1P14543 1247 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 ITGALP20701 1170 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 KDELR1P24390 212 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 MC4RP32245 332 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 HLCSP50747 726 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 MLF1P58340 268 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 SLC26A5P58743 744 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 USP10Q14694 798 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 PDK1Q15118 436 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 DBN1Q16643 649 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 HADHQ16836 314 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 KRTAP24-1Q3LI83 254 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 POMZP3Q6PJE2 187 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 SEM1Q6ZVN7 128 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 PRSS41Q7RTY9 318 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 MDGA2Q7Z553 956 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 PIANPQ8IYJ0 282 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 NAXEQ8NCW5 288 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 OR2A1Q8NGT9 310 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 ELP5Q8TE02 316 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 RNASE6Q93091 150 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 TRIM11Q96F44 468 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 FCRL5Q96RD9 977 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 ERGIC2Q96RQ1 377 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 SECISBP2Q96T21 854 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 CNPPD1Q9BV87 410 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 ZDHHC11Q9H8X9 412 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 C19orf25Q9UFG5 118 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 ADGRE2Q9UHX3 823 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 NCKAP5O14513 1909 aa7.17□□□□□ -1.26
SMARCE1-217ENST00000580654 FEZF1A0PJY2 475 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 C5orf60A6NFR6 353 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 TUBAL3A6NHL2 446 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 LRRC53A6NM62 1247 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 C2orf81A6NN90 581 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 CLDN4O14493 209 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 PPP1R12AO14974 1030 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 SLC16A5O15375 505 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 KDM1AO60341 852 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 AP2A2O94973 939 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 CNOT4O95628 575 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 IFNA2P01563 188 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 CYC1P08574 325 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 CCDC172P0C7W6 258 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 ERVK-10P10266 1014 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 BMP7P18075 431 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 ARHGAP25P42331 645 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 ASCL1P50553 236 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 CSE1LP55060 971 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 MPP3Q13368 585 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 CAPRIN1Q14444 709 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 GPR33Q49SQ1 333 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 MINDY4Q4G0A6 757 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 CCSMST1Q4G0I0 132 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 FILIP1LQ4L180 1135 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 SFT2D3Q587I9 215 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 DNAJC21Q5F1R6 531 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 C1orf185Q5T7R7 199 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 RIPPLY2Q5TAB7 128 aa7.16□□□□□ -1.26
SMARCE1-217ENST00000580654 RANBP10Q6VN20 620 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms