RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 PCNAP12004 261 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 NPPBP16860 134 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 PPIBP23284 216 aaKnown RBP16.9■□□□□ 0.3
TMCO1-207ENST00000580248 TEAD1P28347 426 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 CAPGP40121 348 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 PHEXP78562 749 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 CNTN1Q12860 1018 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 EPS8Q12929 822 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 CAMK2GQ13555 558 aaPredicted RBP16.9■□□□□ 0.3
TMCO1-207ENST00000580248 DDX39BQ13838 428 aaKnown RBP16.9■□□□□ 0.3
TMCO1-207ENST00000580248 PLA2G4EQ3MJ16 856 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 KCTD21Q4G0X4 260 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 PIP5KL1Q5T9C9 394 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 PNCKQ6P2M8 343 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 ZNF547Q8IVP9 402 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 LRRC56Q8IYG6 542 aaPredicted RBP16.9■□□□□ 0.3
TMCO1-207ENST00000580248 GJD3Q8N144 294 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 SVOPLQ8N434 492 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 HUS1BQ8NHY5 278 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 FOXJ1Q92949 421 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 RAD51AP1Q96B01 352 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 SDCCAG3Q96C92 435 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 PHF12Q96QT6 1004 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 PANX1Q96RD7 426 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 TBCDQ9BTW9 1192 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 EBPLQ9BY08 206 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 YTHDF1Q9BYJ9 559 aaKnown RBP16.9■□□□□ 0.3
TMCO1-207ENST00000580248 NTN4Q9HB63 628 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 SLC6A13Q9NSD5 602 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 NDRG2Q9UN36 371 aaKnown RBP16.9■□□□□ 0.3
TMCO1-207ENST00000580248 CORO2BQ9UQ03 480 aa16.9■□□□□ 0.3
TMCO1-207ENST00000580248 KRBA1A5PL33 1030 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 GPR89AB7ZAQ6 455 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 SCAMP2O15127 329 aaKnown RBP16.89■□□□□ 0.29
TMCO1-207ENST00000580248 SCN2BO60939 215 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 EPN2O95208 641 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 CCNDBP1O95273 360 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 KLF8O95600 359 aaPredicted RBP16.89■□□□□ 0.29
TMCO1-207ENST00000580248 RPN2P04844 631 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 GPR89BP0CG08 455 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 GPX2P18283 190 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 KELP23276 732 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 HSD17B2P37059 387 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 HPCAL1P37235 193 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 RPL3P39023 403 aaKnown RBP16.89■□□□□ 0.29
TMCO1-207ENST00000580248 ALDH3A2P51648 485 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 WNT3P56703 355 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 STARD6P59095 220 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 CNPY1Q3B7I2 92 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 BORAQ6PGQ7 559 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 XKR5Q6UX68 686 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 C11orf96Q7Z7L8 435 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 TMPRSS11BQ86T26 416 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 PHACTR4Q8IZ21 702 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 ZNF687Q8N1G0 1237 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 FAM47BQ8NA70 645 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 MAGEE2Q8TD90 523 aaPredicted RBP16.89■□□□□ 0.29
TMCO1-207ENST00000580248 SLC5A11Q8WWX8 675 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 NCSTNQ92542 709 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 DUSP26Q9BV47 211 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 ZDHHC5Q9C0B5 715 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 OR52A5Q9H2C5 316 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 CCDC177Q9NQR7 707 aaPredicted RBP16.89■□□□□ 0.29
TMCO1-207ENST00000580248 SAMD4AQ9UPU9 718 aaKnown RBP16.89■□□□□ 0.29
TMCO1-207ENST00000580248 MRPS17Q9Y2R5 130 aaKnown RBP16.89■□□□□ 0.29
TMCO1-207ENST00000580248 AP1M2Q9Y6Q5 423 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 V9GYQ6 96 aa16.89■□□□□ 0.29
TMCO1-207ENST00000580248 UPK1AO00322 258 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 ADH1BP00325 375 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 ANXA4P09525 319 aaPredicted RBP16.88■□□□□ 0.29
TMCO1-207ENST00000580248 TIA1P31483 386 aaKnown RBP eCLIP16.88■□□□□ 0.291e-8■■■■□ 20.4
TMCO1-207ENST00000580248 PIK3CBP42338 1070 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 CDKN2CP42773 168 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 RAE1P78406 368 aaKnown RBP16.88■□□□□ 0.29
TMCO1-207ENST00000580248 TAP2Q03519 686 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 DAG1Q14118 895 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 STARD3Q14849 445 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 DOK6Q6PKX4 331 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 NXPE4Q6UWF7 544 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 LCTLQ6UWM7 567 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 PDZD3Q86UT5 571 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 SATL1Q86VE3 508 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 LRRTM4Q86VH4 590 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 AMZ2Q86W34 360 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 ANKRD46Q86W74 232 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 RNF175Q8N4F7 328 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 OXR1Q8N573 874 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 C1orf52Q8N6N3 182 aaKnown RBP16.88■□□□□ 0.29
TMCO1-207ENST00000580248 OR7A2PQ8NGA2 310 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 FBXO30Q8TB52 745 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 NCLNQ969V3 563 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 TMBIM1Q969X1 311 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 COQ8BQ96D53 544 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 CAAP1Q9H8G2 361 aa16.88■□□□□ 0.29
TMCO1-207ENST00000580248 CLIC1O00299 241 aa16.87■□□□□ 0.29
TMCO1-207ENST00000580248 ADAM23O75077 832 aa16.87■□□□□ 0.29
TMCO1-207ENST00000580248 CST1P01037 141 aa16.87■□□□□ 0.29
TMCO1-207ENST00000580248 GSNP06396 782 aa16.87■□□□□ 0.29
TMCO1-207ENST00000580248 CHRNB1P11230 501 aa16.87■□□□□ 0.29
TMCO1-207ENST00000580248 ARSFP54793 590 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms