RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 ACSL3O95573 720 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 UMODP07911 640 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 UQCRHP07919 91 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 IL1RNP18510 177 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 BCL6P41182 706 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 CDKL1Q00532 357 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 MEF2AQ02078 507 aaPredicted RBP10.37□□□□□ -0.75
NDEL1-208ENST00000580237 RAPSNQ13702 412 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 DSG2Q14126 1118 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 MFSD4BQ5TF39 518 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 TAOK1Q7L7X3 1001 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 PPP1R32Q7Z5V6 425 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 CMC1Q7Z7K0 106 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 THOC6Q86W42 341 aaKnown RBP10.37□□□□□ -0.75
NDEL1-208ENST00000580237 GPSM1Q86YR5 675 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 TCAIMQ8N3R3 496 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 TEX19Q8NA77 164 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 STT3BQ8TCJ2 826 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 PCSK5Q92824 1860 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 NEIL2Q969S2 332 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 CYTH2Q99418 400 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 SPSB2Q99619 263 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 AIF1LQ9BQI0 150 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 MCMBPQ9BTE3 642 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 TRIM4Q9C037 500 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 SLC26A1Q9H2B4 701 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 SYNPO2LQ9H987 977 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 CNOT10Q9H9A5 744 aaKnown RBP10.37□□□□□ -0.75
NDEL1-208ENST00000580237 ANKHQ9HCJ1 492 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 ENAMQ9NRM1 1142 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 SEMA3GQ9NS98 782 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 NINJ2Q9NZG7 142 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 CD274Q9NZQ7 290 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 DMGDHQ9UI17 866 aaKnown RBP10.37□□□□□ -0.75
NDEL1-208ENST00000580237 ANAPC2Q9UJX6 822 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 RNF112Q9ULX5 631 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 KCNE2Q9Y6J6 123 aa10.37□□□□□ -0.75
NDEL1-208ENST00000580237 TRBC2A0A5B9 178 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 SUPT3HB4E1H0 165 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 J3QKU1 62 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 AGPSO00116 658 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 SUPT3HO75486 399 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 ALPPP05187 535 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 INHBAP08476 426 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 ZGLP1P0C6A0 271 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 ACPPP15309 386 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 CD1DP15813 335 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 NPPBP16860 134 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 MMP11P24347 488 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 ITGA3P26006 1051 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 CRABP2P29373 138 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 SERPINB8P50452 374 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 SKP1P63208 163 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 KLC1Q07866 573 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 RGS1Q08116 209 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 KLRB1Q12918 225 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 BMPR2Q13873 1038 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 FAM53BQ14153 422 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 TGFBIQ15582 683 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 ZKSCAN8Q15776 578 aaPredicted RBP10.36□□□□□ -0.75
NDEL1-208ENST00000580237 TUBB8Q3ZCM7 444 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 DCAF10Q5QP82 559 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 CATSPEREQ5SY80 951 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 VN1R4Q7Z5H5 301 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 SNX31Q8N9S9 440 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 MFSD9Q8NBP5 474 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 ABHD11Q8NFV4 315 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 OR9A4Q8NGU2 314 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 SLC13A3Q8WWT9 602 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 OR4K3Q96R72 315 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 MACROD1Q9BQ69 325 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 CDC42EP4Q9H3Q1 356 aaKnown RBP10.36□□□□□ -0.75
NDEL1-208ENST00000580237 ACSS3Q9H6R3 686 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 PELI2Q9HAT8 420 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 MKKSQ9NPJ1 570 aaPredicted RBP10.36□□□□□ -0.75
NDEL1-208ENST00000580237 C3orf18Q9UK00 162 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 FBXL4Q9UKA2 621 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 SLC22A14Q9Y267 594 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 ZNF451Q9Y4E5 1061 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 MAP4K5Q9Y4K4 846 aa10.36□□□□□ -0.75
NDEL1-208ENST00000580237 PCDHGA9Q9Y5G4 932 aaKnown RBP10.36□□□□□ -0.75
NDEL1-208ENST00000580237 KALRNO60229 2985 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 CNTRLQ7Z7A1 2325 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 BAHCC1Q9P281 2608 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 KCNE1BA0A087WTH5 132 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 KLHL41O60662 606 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 ALOX12BO75342 701 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 IPO13O94829 963 aaKnown RBP10.35□□□□□ -0.75
NDEL1-208ENST00000580237 ONECUT2O95948 504 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 C1QAP02745 245 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 HEXBP07686 556 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 LTA4HP09960 611 aaKnown RBP10.35□□□□□ -0.75
NDEL1-208ENST00000580237 SLC35E2BP0CK96 405 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 GNAZP19086 355 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 TFEBP19484 476 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 CXCR2P25025 360 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 MAT1AQ00266 395 aaKnown RBP10.35□□□□□ -0.75
NDEL1-208ENST00000580237 REEP5Q00765 189 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 CDC16Q13042 620 aa10.35□□□□□ -0.75
NDEL1-208ENST00000580237 RBBP5Q15291 538 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms