RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 ANKRD53Q8N9V6 530 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 MFSD9Q8NBP5 474 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 AGBL5Q8NDL9 886 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 OR7G3Q8NG95 312 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 METTL6Q8TCB7 284 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 THAP11Q96EK4 314 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 STRADBQ9C0K7 418 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 SIDT1Q9NXL6 827 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 ZDHHC2Q9UIJ5 367 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 HAO1Q9UJM8 370 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 PLCL2Q9UPR0 1127 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 RAP2CQ9Y3L5 183 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 PCDHGA4Q9Y5G9 962 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 PCDHGA11Q9Y5H2 935 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 PIEZO1Q92508 2521 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 FFAR3O14843 346 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 AZIN1O14977 448 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 GPR42O15529 346 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 UROSP10746 265 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 HMOX2P30519 316 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 AHRP35869 848 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 SH2D4BQ5SQS7 431 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 ADNP2Q6IQ32 1131 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 MCATQ8IVS2 390 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 WDR20Q8TBZ3 569 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 REPS1Q96D71 796 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 LIN37Q96GY3 246 aaPredicted RBP15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 CMKLR1Q99788 373 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 SLC29A3Q9BZD2 475 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 ILKAPQ9H0C8 392 aaPredicted RBP15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 RHBGQ9H310 441 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 CCDC134Q9H6E4 229 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 OCIAD1Q9NX40 245 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 ZFP69BQ9UJL9 534 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 TSC22D4Q9Y3Q8 395 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 TRAF6Q9Y4K3 522 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 TIMM22Q9Y584 194 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 AP1M2Q9Y6Q5 423 aa15.21■□□□□ 0.03
CSNK1D-212ENST00000580061 LOC105369274A0A096LPK9 316 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 LOC102723532A0A0G2JNH3 316 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 H0YGG7 62 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 AGRPO00253 132 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 SRPX2O60687 465 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 CRCPO75575 148 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 PCNAP12004 261 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 GSTM2P28161 218 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 SERPINB3P29508 390 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 GYS2P54840 703 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 ARF3P61204 181 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 ACY1Q03154 408 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 TARDBPQ13148 414 aaKnown RBP eCLIP15.2■□□□□ 0.023e-6■■■■□ 20.8
CSNK1D-212ENST00000580061 PUM1Q14671 1186 aaKnown RBP eCLIP15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 GPR19Q15760 415 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 TCHHL1Q5QJ38 904 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 KANK2Q63ZY3 851 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 FRG2Q64ET8 278 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 TTC19Q6DKK2 380 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 CLEC6AQ6EIG7 209 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 VN1R5Q7Z5H4 357 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 VN1R4Q7Z5H5 301 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 CLYBLQ8N0X4 340 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 OR4N4Q8N0Y3 316 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 CHCHD4Q8N4Q1 142 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 BMPERQ8N8U9 685 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 TTLQ8NG68 377 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 AGR3Q8TD06 166 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 ZNF501Q96CX3 271 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 TM4SF19Q96DZ7 209 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 SEC16BQ96JE7 1060 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 C7orf26Q96N11 449 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 ZNF285Q96NJ3 590 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 FRG2BQ96QU4 278 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 SLCO1B3Q9NPD5 702 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 FGF21Q9NSA1 209 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 AKAP7Q9P0M2 348 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 SNX6Q9UNH7 406 aa15.2■□□□□ 0.02
CSNK1D-212ENST00000580061 CCDC187A0A096LP49 1063 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 ANKDD1BA6NHY2 528 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 EFCAB7A8K855 629 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 TMEM233B4DJY2 109 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 TCP11X1B4DZS4 312 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 H3BMH7 237 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 POLR3GO15318 223 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 KRT6AP02538 564 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 KRT6BP04259 564 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 CTSBP07858 339 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 KRT6CP48668 564 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 HTR6P50406 440 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 RPL14P50914 215 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 NEK2P51955 445 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 VSX2P58304 361 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 IFT88Q13099 833 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 UGT3A2Q3SY77 523 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 C10orf62Q5T681 223 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 RAB11FIP2Q7L804 512 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 TMPRSS7Q7RTY8 843 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 ASPGQ86U10 573 aa15.19■□□□□ 0.02
CSNK1D-212ENST00000580061 KIRREL3Q8IZU9 778 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms