RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 PHKG1Q16816 387 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 LSM12Q3MHD2 195 aaKnown RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 KHDC1Q4VXA5 237 aaKnown RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 CLEC6AQ6EIG7 209 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 DOK6Q6PKX4 331 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 SLC30A9Q6PML9 568 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 RPS27LQ71UM5 84 aaKnown RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 LRRC70Q7Z2Q7 622 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 GOLGA7Q7Z5G4 137 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 MILR1Q7Z6M3 343 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 AMZ2Q86W34 360 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 CFAP206Q8IYR0 622 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 SLC22A15Q8IZD6 547 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 SNX31Q8N9S9 440 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 AGBL5Q8NDL9 886 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 CFAP61Q8NHU2 1237 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 METTL6Q8TCB7 284 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 GPBAR1Q8TDU6 330 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 TWIST2Q8WVJ9 160 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 PATE1Q8WXA2 126 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 MCUR1Q96AQ8 359 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 RHBDF1Q96CC6 855 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 RNF31Q96EP0 1072 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 ABHD17AQ96GS6 310 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 LINC00615Q96LM1 132 aaPredicted RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 CCDC138Q96M89 665 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 NSUN5Q96P11 429 aaKnown RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 CATSPER2Q96P56 530 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 OR52B2Q96RD2 323 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 B3GNT4Q9C0J1 378 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 NOL11Q9H8H0 719 aaKnown RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 IPPKQ9H8X2 491 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 GPN2Q9H9Y4 310 aaPredicted RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 OCIAD1Q9NX40 245 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 ATXN10Q9UBB4 475 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 CNOT6Q9ULM6 557 aaKnown RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 PDE10AQ9Y233 779 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 CREBBPQ92793 2442 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 SLC5A10A0PJK1 596 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 MGAT4DA6NG13 374 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 LRRC14BA6NHZ5 514 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 GFYI3L273 518 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 IFRD1O00458 451 aaPredicted RBP9.8□□□□□ -0.84
SS18-210ENST00000578700 TNFRSF10CO14798 259 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 KMOO15229 486 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 SGTAO43765 313 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 PSIP1O75475 530 aaKnown RBP9.8□□□□□ -0.84
SS18-210ENST00000578700 MATN4O95460 622 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 CBX6O95503 412 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 SOD1P00441 154 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 MYCLP1P12525 358 aaPredicted RBP9.8□□□□□ -0.84
SS18-210ENST00000578700 ZNF8P17098 575 aaPredicted RBP9.8□□□□□ -0.84
SS18-210ENST00000578700 GGT5P36269 586 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 GNPDA1P46926 289 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 KIAA1024LP59773 190 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 CDK3Q00526 305 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 DNAL1Q4LDG9 190 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 FBXO48Q5FWF7 155 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 DCAF12Q5T6F0 453 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 CRTC3Q6UUV7 619 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 TRIM74Q86UV6 250 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 MYLK4Q86YV6 388 aaPredicted RBP9.8□□□□□ -0.84
SS18-210ENST00000578700 SPNS2Q8IVW8 549 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 PELI3Q8N2H9 469 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 RAB42Q8N4Z0 105 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 CPSF7Q8N684 471 aaKnown RBP9.8□□□□□ -0.84
SS18-210ENST00000578700 OR2L2Q8NH16 312 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 TUBGCP3Q96CW5 907 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 PTCD3Q96EY7 689 aaKnown RBP9.8□□□□□ -0.84
SS18-210ENST00000578700 AHCYL2Q96HN2 611 aaKnown RBP9.8□□□□□ -0.84
SS18-210ENST00000578700 COX14Q96I36 57 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 MAELQ96JY0 434 aaKnown RBP9.8□□□□□ -0.84
SS18-210ENST00000578700 PSMG3-AS1Q96PY0 264 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 CTRCQ99895 268 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 BTBD10Q9BSF8 475 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 CCDC106Q9BWC9 280 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 TEX101Q9BY14 249 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 GSDMCQ9BYG8 508 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 ACTR8Q9H981 624 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 RMI1Q9H9A7 625 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 DNAJC11Q9NVH1 559 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 ARL8BQ9NVJ2 186 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 NDE1Q9NXR1 346 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 TMEM9Q9P0T7 183 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 TAAR2Q9P1P5 351 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 ZNHIT2Q9UHR6 403 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 TUBD1Q9UJT1 453 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 DNAJC15Q9Y5T4 150 aa9.8□□□□□ -0.84
SS18-210ENST00000578700 LOC101059948A0A1B0GTJ6 334 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 PRR19A6NJB7 356 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 CAPN14A8MX76 684 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 B2RBV5 119 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 SDHDO14521 159 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 PIP5K1BO14986 540 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 PPM1DO15297 605 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 TAPBPO15533 448 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 KCNJ13O60928 360 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 WDR47O94967 919 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 OR4F21O95013 312 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 CLDN9O95484 217 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms