RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CANT1Q8WVQ1 401 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 ZFPM2Q8WW38 1151 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 EZH1Q92800 747 aaPredicted RBP10.71□□□□□ -0.69
SKA2-204ENST00000578519 N4BP2L2Q92802 583 aaPredicted RBP10.71□□□□□ -0.69
SKA2-204ENST00000578519 FAM162AQ96A26 154 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 SDCCAG3Q96C92 435 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 CENPNQ96H22 339 aaPredicted RBP10.71□□□□□ -0.69
SKA2-204ENST00000578519 MRGPRX1Q96LB2 322 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 TMEM74Q96NL1 305 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 PAIP1Q9H074 479 aaKnown RBP10.71□□□□□ -0.69
SKA2-204ENST00000578519 REEP4Q9H6H4 257 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 CARS2Q9HA77 564 aaKnown RBP10.71□□□□□ -0.69
SKA2-204ENST00000578519 SLC2A4RGQ9NR83 387 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 TMEM184CQ9NVA4 438 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 ATP6V1HQ9UI12 483 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 ADAM29Q9UKF5 820 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 SUFUQ9UMX1 484 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 VPS4AQ9UN37 437 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 DMTF1Q9Y222 760 aa10.71□□□□□ -0.69
SKA2-204ENST00000578519 TCRBV21S2A2A0A5A6 115 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 PRSS38A1L453 326 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 PRAMEF26H0Y7S4 382 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 RNASET2O00584 256 aaKnown RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 MBTPS2O43462 519 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 DENRO43583 198 aaKnown RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 DFNA5O60443 496 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 LRATO95237 230 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 TNFP01375 233 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 RETP07949 1114 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 RAP2AP10114 183 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 SRFP11831 508 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 IL1RNP18510 177 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 COL9A1P20849 921 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 ATP6V1B2P21281 511 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 MAT2AP31153 395 aaKnown RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 RABIFP47224 123 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 MTPNP58546 118 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 TRA2BP62995 288 aaKnown RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 REEP5Q00765 189 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 PRDX1Q06830 199 aaKnown RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 TGM3Q08188 693 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 C2orf80Q0P641 193 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 HEPACAMQ14CZ8 416 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 PUS10Q3MIT2 529 aaKnown RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 TMEM35AQ53FP2 167 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 INTS11Q5TA45 600 aaKnown RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 OR4F3Q6IEY1 312 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 ZNF852Q6ZMS4 543 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 ZNF621Q6ZSS3 439 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 SERPINA11Q86U17 422 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 FAM129CQ86XR2 697 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 TMEM102Q8N9M5 508 aaPredicted RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 OR10A6Q8NH74 314 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 RGMAQ96B86 450 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 BIRC7Q96CA5 298 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 PPCDCQ96CD2 204 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 COQ8BQ96D53 544 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 REXO5Q96IC2 774 aaKnown RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 ZNF583Q96ND8 569 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 INSM2Q96T92 566 aaPredicted RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 OSBPL11Q9BXB4 747 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 EBPLQ9BY08 206 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 MAGIXQ9H6Y5 334 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 KIR3DX1Q9H7L2 352 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 MYNNQ9NPC7 610 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 IMP3Q9NV31 184 aaKnown RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 VAPAQ9P0L0 249 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 SH3BP4Q9P0V3 963 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 PDP2Q9P2J9 529 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 SPASTQ9UBP0 616 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 CIDEBQ9UHD4 219 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 TAC3Q9UHF0 121 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 RPS6KA6Q9UK32 745 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 SNX7Q9UNH6 387 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 SAMD4AQ9UPU9 718 aaKnown RBP10.7□□□□□ -0.7
SKA2-204ENST00000578519 PCDHB14Q9Y5E9 798 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 ATG2AQ2TAZ0 1938 aa10.7□□□□□ -0.7
SKA2-204ENST00000578519 PCNTO95613 3336 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 RNF103-CHMP3A0A140T963 221 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 TRBC2A0A5B9 178 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 OR5K4A6NMS3 321 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 H3BQ06 376 aaPredicted RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 CLIC1O00299 241 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 CXCR6O00574 342 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 ZNF217O75362 1048 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 CLEC3AO75596 197 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 FKBP9O95302 570 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 CPSF4O95639 269 aaKnown RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 KRT75O95678 551 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 SEMA4FO95754 770 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 TGFB1P01137 390 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 MTHFD1P11586 935 aaKnown RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 NDUFV2P19404 249 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 RPL10P27635 214 aaKnown RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 PKLRP30613 574 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 EMP3P54852 163 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 PLIN5Q00G26 463 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 FOLH1Q04609 750 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 PRKCQQ04759 706 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 TDGQ13569 410 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms