RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PAX4O43316 350 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 DNAJC8O75937 253 aaPredicted RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 IPO7O95373 1038 aaKnown RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 IFNB1P01574 187 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 FTH1P02794 183 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 UMODP07911 640 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 SPTBP11277 2137 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 ITGAXP20702 1163 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 AGXTP21549 392 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 MCM3P25205 808 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 PSMA3P25788 255 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 GRIA3P42263 894 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 HSPA14Q0VDF9 509 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 GRB7Q14451 532 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 ZNF460Q14592 562 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 ITIH4Q14624 930 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 CCSMST1Q4G0I0 132 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 TSTD2Q5T7W7 516 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 FHL5Q5TD97 284 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 STEAP3Q658P3 488 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 OGFOD2Q6N063 350 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 PACS1Q6VY07 963 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 PPP1R21Q6ZMI0 780 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 SHISA6Q6ZSJ9 500 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 MED25Q71SY5 747 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 PPP1R32Q7Z5V6 425 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 MILR1Q7Z6M3 343 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 MRGPREQ86SM8 312 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 GAS2L3Q86XJ1 694 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 RAB43Q86YS6 212 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 TBC1D21Q8IYX1 336 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 GPR135Q8IZ08 494 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 DNAJC22Q8N4W6 341 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 CISD2Q8N5K1 135 aaKnown RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 UBL4BQ8N7F7 174 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 DNAAF3Q8N9W5 541 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 LINC01555Q8NAE3 123 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 FBXO15Q8NCQ5 510 aaPredicted RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 OR5K2Q8NHB8 316 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 C1orf54Q8WWF1 131 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 N4BP2L2Q92802 583 aaPredicted RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 LRRC45Q96CN5 670 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 HES6Q96HZ4 224 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 GBP5Q96PP8 586 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 PPP1R2P1Q96PQ5 205 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 SMAD5Q99717 465 aaKnown RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 BAG1Q99933 345 aaPredicted RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 C19orf43Q9BQ61 176 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 MESP1Q9BRJ9 268 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 AP1M1Q9BXS5 423 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 SYTL2Q9HCH5 934 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 SLAMF7Q9NQ25 335 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 CASS4Q9NQ75 786 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 CATSPERZQ9NTU4 200 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 IRAK4Q9NWZ3 460 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 SIRT5Q9NXA8 310 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 P4HTMQ9NXG6 502 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 GPR83Q9NYM4 423 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 MARCH4Q9P2E8 410 aaPredicted RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 IFT80Q9P2H3 777 aaPredicted RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 PLEKHB1Q9UF11 243 aaPredicted RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 RUVBL2Q9Y230 463 aaKnown RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 TNPO3Q9Y5L0 923 aaKnown RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 PTPN13Q12923 2485 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 MAST4O15021 2626 aa5.96□□□□□ -1.45
NUP88-212ENST00000576708 MIF4GDA9UHW6 222 aaKnown RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 ZSCAN9O15535 394 aaPredicted RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 LIASO43766 372 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 NRP2O60462 931 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 DPM1O60762 260 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 SUN1O94901 812 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 F7P08709 466 aaPredicted RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 HBQ1P09105 142 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 OR56A5P0C7T3 313 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 MAGP20916 626 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 PKLRP30613 574 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 RPL22P35268 128 aaKnown RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 FOLR3P41439 243 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 BDKRB1P46663 353 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 TERF1P54274 439 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 SESN2P58004 480 aaPredicted RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 CRADDP78560 199 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 DCDP81605 110 aaKnown RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 KIF5AQ12840 1032 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 CDH17Q12864 832 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 SSPNQ14714 243 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 KIR2DS3Q14952 304 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 OASLQ15646 514 aaKnown RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 SLC5A12Q1EHB4 618 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 P3H1Q32P28 736 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 NKAIN1Q4KMZ8 207 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 DCAF10Q5QP82 559 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 FCRL6Q6DN72 434 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 RHBDD2Q6NTF9 364 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 ABHD17CQ6PCB6 329 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 AFTPHQ6ULP2 937 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 TTLL10Q6ZVT0 673 aa5.96□□□□□ -1.46
NUP88-212ENST00000576708 SYDE1Q6ZW31 735 aaPredicted RBP5.96□□□□□ -1.46
NUP88-212ENST00000576708 LURAP1LQ8IV03 231 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms