RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 TLL1O43897 1013 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 OR1I1O60431 355 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 BMP4P12644 408 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 CA5AP35218 305 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 GSTM4Q03013 218 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 RPA4Q13156 261 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 SPHARQ15513 63 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 PTCHD3Q3KNS1 767 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ATP13A5Q4VNC0 1218 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 DSG4Q86SJ6 1040 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 NPAS3Q8IXF0 933 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 AP2M1Q96CW1 435 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 FAM129BQ96TA1 746 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 IL1RAPQ9NPH3 570 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ABCB8Q9NUT2 735 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 MED11Q9P086 117 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 PCTPQ9UKL6 214 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 NAV1Q8NEY1 1877 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 PPP6CO00743 305 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 MRPS14O60783 128 aaKnown RBP12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 PCDH8O95206 1070 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ALPLP05186 524 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 DPP6P42658 865 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 HMBOX1Q6NT76 420 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 SH2D5Q6ZV89 423 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 Q8N402 240 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ADAMTS15Q8TE58 950 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 FEVQ99581 238 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 AIF1LQ9BQI0 150 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 TNKS2Q9H2K2 1166 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 IL37Q9NZH6 218 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 NUFIP1Q9UHK0 495 aaKnown RBP12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 PCDHB14Q9Y5E9 798 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 GPR45Q9Y5Y3 372 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 NUP98P52948 1817 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 RGPD5Q99666 1765 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 CLCA1A8K7I4 914 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 CELF2O95319 508 aaKnown RBP12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 EDN1P05305 212 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 RYKP34925 604 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 MAPK9P45984 424 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 SNRPD2P62316 118 aaKnown RBP12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 RHAGQ02094 409 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 PCDH1Q08174 1060 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 UGT8Q16880 541 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 VTCN1Q7Z7D3 282 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 NETO1Q8TDF5 533 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 MUL1Q969V5 352 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 RHCGQ9UBD6 479 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 ALPIP09923 528 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 SAGP10523 405 aaPredicted RBP12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 MS4A13Q5J8X5 152 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 BEND5Q7L4P6 421 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 NOXA1Q86UR1 476 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 GHDCQ8N2G8 530 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 C2orf73Q8N5S3 287 aaPredicted RBP12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 DOHHQ9BU89 302 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 TMEM248Q9NWD8 314 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 VAPAQ9P0L0 249 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 KIAA1522Q9P206 1035 aaPredicted RBP12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 CPSF4LA6NMK7 179 aaKnown RBP12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 FAM25EA8MYX2 175 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 ENTPD6O75354 484 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 GTDC1Q4AE62 458 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZNF767PQ75MW2 155 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 DNAJB7Q7Z6W7 309 aaPredicted RBP12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 FAM98AQ8NCA5 519 aaKnown RBP12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 DEDD2Q8WXF8 326 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 ENAMQ9NRM1 1142 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 PCDH10Q9P2E7 1040 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 CD84Q9UIB8 345 aa12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 N4BP2Q86UW6 1770 aaPredicted RBP12.72□□□□□ -0.37
PCDHGB3-201ENST00000576222 DAPL1A0PJW8 107 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 USP2O75604 605 aaPredicted RBP12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 SMSP52788 366 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 ERVPABLB-1P60509 514 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 PPIGQ13427 754 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 KEAP1Q14145 624 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZNF630Q2M218 657 aaPredicted RBP12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 CLEC12AQ5QGZ9 265 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 FUBP1Q96AE4 644 aaKnown RBP12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 FUBP3Q96I24 572 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 TSSK6Q9BXA6 273 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 MAB21L2Q9Y586 359 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 TRAV6A0A075B6T7 132 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 IGKV6-21A0A0C4DH24 114 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 ARSAP15289 507 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 OR1D2P34982 312 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 FCGRTP55899 365 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 AP1S2P56377 157 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 PPP2R2BQ00005 443 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 DEFA5Q01523 94 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 SEMG2Q02383 582 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZNF311Q5JNZ3 666 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 GARNL3Q5VVW2 1013 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 ARMC6Q6NXE6 501 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 LINGO2Q7L985 606 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 GALNT10Q86SR1 603 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 YAF2Q8IY57 180 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms