RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 TSR3Q9UJK0 312 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 L3MBTL1Q9Y468 752 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 ALG6Q9Y672 507 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 IGKV1-8A0A0C4DH67 115 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 P2RX6O15547 441 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 PKMP14618 531 aaKnown RBP15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 TPP2P29144 1249 aaPredicted RBP15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 UBASH3AP57075 661 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 CMPK2Q5EBM0 449 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 EMC4Q5J8M3 183 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 KCTD11Q693B1 232 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 ARSKQ6UWY0 536 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 ADCK2Q7Z695 626 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 POGLUT1Q8NBL1 392 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 MYRIPQ8NFW9 859 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 OR5M3Q8NGP4 307 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 OR6P1Q8NGX9 317 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 FOPNLQ96NB1 174 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 LPAR4Q99677 370 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 LRRC40Q9H9A6 602 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 SPTLC3Q9NUV7 552 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 SLC2A6Q9UGQ3 507 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 PCYOX1Q9UHG3 505 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 R3HDM2Q9Y2K5 976 aaKnown RBP15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 MRFAP1Q9Y605 127 aa15.29■□□□□ 0.04
CTDNEP1-211ENST00000575783 CYC1P08574 325 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 INHBBP09529 407 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 PSMA3P25788 255 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 CCNFP41002 786 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 ITGA8P53708 1063 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 SEMA3AQ14563 771 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 NSDHLQ15738 373 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 FASTKD1Q53R41 847 aaKnown RBP15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 PTRHD1Q6GMV3 140 aaKnown RBP15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 ARHGAP11AQ6P4F7 1023 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 AFTPHQ6ULP2 937 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 PRSS41Q7RTY9 318 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 LDB1Q86U70 411 aaPredicted RBP15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 ZNF227Q86WZ6 799 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 PLD3Q8IV08 490 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 SULF2Q8IWU5 870 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 KIF2BQ8N4N8 673 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 LRRN4CLQ8ND94 238 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 OR13J1Q8NGT2 312 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 OR4L1Q8NH43 312 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 MAGEC3Q8TD91 643 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 MCOLN3Q8TDD5 553 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 NUDT8Q8WV74 236 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 SLC6A16Q9GZN6 736 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 DEFB127Q9H1M4 99 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 RASSF1Q9NS23 344 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 ABCF3Q9NUQ8 709 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 UTP6Q9NYH9 597 aaKnown RBP15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 SPATA7Q9P0W8 599 aa15.28■□□□□ 0.04
CTDNEP1-211ENST00000575783 HCFC1P51610 2035 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 H0YIG0 161 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 KLRC4-KLRK1H3BQV0 150 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 PEX1O43933 1283 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 METTL18O95568 372 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 EZRP15311 586 aaKnown RBP15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 PPARGP37231 505 aaPredicted RBP15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 KIR2DL3P43628 341 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 NR0B1P51843 470 aaKnown RBP15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 USP10Q14694 798 aaKnown RBP15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 ABRAXAS2Q15018 415 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 PARP6Q2NL67 630 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 CAMKMTQ7Z624 323 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 CDC20BQ86Y33 519 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 KLHDC8BQ8IXV7 354 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 LGI4Q8N135 537 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 OR52N2Q8NGI0 321 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 SMPDL3AQ92484 453 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 TAC3Q9UHF0 121 aa15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 KLF13Q9Y2Y9 288 aaPredicted RBP15.27■□□□□ 0.04
CTDNEP1-211ENST00000575783 FBN1P35555 2871 aaKnown RBP15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 HRNRQ86YZ3 2850 aaPredicted RBP15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 NPIPA2E9PIF3 369 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 NPIPA3F8WFD2 350 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 SGK494L7N484 410 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 HAT1O14929 419 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 CDC123O75794 336 aaPredicted RBP15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 NSA2O95478 260 aaKnown RBP15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 HLCSP50747 726 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 OR4D2P58180 307 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 SLC26A5P58743 744 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 PRDX1Q06830 199 aaKnown RBP15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 ZNF425Q6IV72 752 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 ZNF534Q76KX8 674 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 OTOAQ7RTW8 1153 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 OR5M9Q8NGP3 310 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 KRT35Q92764 455 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 MBD6Q96DN6 1003 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 ARSGQ96EG1 525 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 MACROD1Q9BQ69 325 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 RBCK1Q9BYM8 510 aa15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.26■□□□□ 0.03
CTDNEP1-211ENST00000575783 PRMT5O14744 637 aaPredicted RBP15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 IL1RNP18510 177 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 BCL6P41182 706 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 GPR85P60893 370 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms