RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 TMEM120BA0PK00 339 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 HMGB1P1B2RPK0 211 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-217ENST00000575711 H3BMH7 237 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 OR7A17O14581 309 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ZNF749O43361 778 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 LCMT2O60294 686 aaKnown RBP13.36□□□□□ -0.27
RPAIN-217ENST00000575711 PRAMEF4O60810 478 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 CPNE3O75131 537 aaKnown RBP13.36□□□□□ -0.27
RPAIN-217ENST00000575711 WFS1O76024 890 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 STK17BO94768 372 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 KIAA0754O94854 1291 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 TIAF1O95411 115 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 MLYCDO95822 493 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 OTCP00480 354 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 CTSBP07858 339 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 GSTM2P28161 218 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ALDH3A1P30838 453 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 AHRP35869 848 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 HNF4AP41235 474 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ETV4P43268 484 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 SCTRP47872 440 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 NAGLUP54802 743 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 E2F2Q14209 437 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 TBC1D25Q3MII6 688 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 TTMPQ5BVD1 217 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 PRAMEF9Q5VWM5 478 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 GRHL2Q6ISB3 625 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 TMIGD1Q6UXZ0 262 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 RPS27LQ71UM5 84 aaKnown RBP13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ASPGQ86U10 573 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ANKRD42Q8N9B4 389 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 CAMKVQ8NCB2 501 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ZNF740Q8NDX6 193 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 TTLQ8NG68 377 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 TRPC4APQ8TEL6 797 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 NDC1Q9BTX1 674 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 NTMT1Q9BV86 223 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 DRC3Q9H069 523 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 CCDC86Q9H6F5 360 aaKnown RBP13.36□□□□□ -0.27
RPAIN-217ENST00000575711 NT5DC2Q9H857 520 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ACTR5Q9H9F9 607 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ZBTB26Q9HCK0 441 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 PRM3Q9NNZ6 103 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ACSS2Q9NR19 701 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ENAMQ9NRM1 1142 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 STARD5Q9NSY2 213 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 ZFP69BQ9UJL9 534 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 SRPK3Q9UPE1 567 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 KNTC1P50748 2209 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 SPTBN2O15020 2390 aa13.36□□□□□ -0.27
RPAIN-217ENST00000575711 FITM1A5D6W6 292 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 STMND1H3BQB6 276 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 NDUFS4O43181 175 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 CLDN9O95484 217 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 NTRK1P04629 796 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 BPGMP07738 259 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 HBQ1P09105 142 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 SLC35G6P0C7Q6 338 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 ZNF28P17035 718 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 TSPAN8P19075 237 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 CD22P20273 847 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 SERPINB4P48594 390 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 SLC18A1P54219 525 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 ARSFP54793 590 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 FOXK2Q01167 660 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 FAM214AQ32MH5 1076 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 PRAMEF17Q5VTA0 474 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 YOD1Q5VVQ6 348 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-217ENST00000575711 MED27Q6P2C8 311 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 VN1R4Q7Z5H5 301 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 MILR1Q7Z6M3 343 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPAIN-217ENST00000575711 ANKRD53Q8N9V6 530 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 TRPV3Q8NET8 790 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 OR52B6Q8NGF0 335 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 MDM1Q8TC05 714 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 SLC13A3Q8WWT9 602 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 REPS1Q96D71 796 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 CLIP3Q96DZ5 547 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 MOCOSQ96EN8 888 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 SEC16BQ96JE7 1060 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 MAGEB10Q96LZ2 347 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-217ENST00000575711 MECRQ9BV79 373 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 GSTO2Q9H4Y5 243 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 SYNPO2LQ9H987 977 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 NKIRAS1Q9NYS0 192 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 ACSL6Q9UKU0 697 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 TMEM184BQ9Y519 407 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-217ENST00000575711 PCM1Q15154 2024 aa13.35□□□□□ -0.27
RPAIN-217ENST00000575711 SNRNP200O75643 2136 aaKnown RBP13.34□□□□□ -0.27
RPAIN-217ENST00000575711 KIF26BQ2KJY2 2108 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 HYKKA2RU49 373 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 ANKDD1BA6NHY2 528 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 BIRC5O15392 142 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 ATP8B1O43520 1251 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 STATHP02808 62 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 SERPIND1P05546 499 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 HPDP32754 393 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-217ENST00000575711 EMP3P54852 163 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 CYP4F2P78329 520 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms