RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CYTH2Q99418 400 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 TTC1Q99614 292 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 NPAS2Q99743 824 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 FERMT1Q9BQL6 677 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 PLEKHF2Q9H8W4 249 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 TRIM45Q9H8W5 580 aaPredicted RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 PNPLA3Q9NST1 481 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 AIPL1Q9NZN9 384 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 CTTNBP2NLQ9P2B4 639 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 Q9UFV3 132 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 MTRF1LQ9UGC7 380 aaKnown RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 LIMA1Q9UHB6 759 aaKnown RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 CIDEBQ9UHD4 219 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 TRHDEQ9UKU6 1024 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 AAR2Q9Y312 384 aaKnown RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 ANK3Q12955 4377 aaKnown RBP5.53□□□□□ -1.52
SMG6-219ENST00000575663 CNTRLQ7Z7A1 2325 aa5.53□□□□□ -1.52
SMG6-219ENST00000575663 JMJD1CQ15652 2540 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 FBN1P35555 2871 aaKnown RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 STAB1Q9NY15 2570 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 TUBAL3A6NHL2 446 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 CLCA1A8K7I4 914 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 HSPB2A8KAH6 182 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 SYT5O00445 386 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 CCL22O00626 93 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 DVL2O14641 736 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 FOXS1O43638 330 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 NRP2O60462 931 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 CCNDBP1O95273 360 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 NSA2O95478 260 aaKnown RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 APOA4P06727 396 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 GLI4P10075 376 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 EPXP11678 715 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 PKMP14618 531 aaKnown RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 GABRA1P14867 456 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 EZRP15311 586 aaKnown RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 TRHRP34981 398 aaPredicted RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 XCR1P46094 333 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 CDKN1CP49918 316 aaPredicted RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 HLCSP50747 726 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 EFNA3P52797 238 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 CSE1LP55060 971 aaKnown RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 SLC26A5P58743 744 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 GPR85P60893 370 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 HSPA14Q0VDF9 509 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 PRPSAP1Q14558 356 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 USP10Q14694 798 aaKnown RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 MESDQ14696 234 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 ABRAXAS2Q15018 415 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 ZKSCAN8Q15776 578 aaPredicted RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 HSPB2Q16082 182 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 HKDC1Q2TB90 917 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 FILIP1LQ4L180 1135 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 SFT2D3Q587I9 215 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 C1orf185Q5T7R7 199 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 WLSQ5T9L3 541 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 RIPPLY2Q5TAB7 128 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 ZNF468Q5VIY5 522 aaPredicted RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 E4F1Q66K89 784 aaPredicted RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 HMBOX1Q6NT76 420 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 PRSS57Q6UWY2 283 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 RGS9BPQ6ZS82 235 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 YTHDF3Q7Z739 585 aaKnown RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 LUZP1Q86V48 1076 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 KIF18BQ86Y91 864 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 LIX1LQ8IVB5 337 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 CIARTQ8N365 385 aaPredicted RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 VWA5B2Q8N398 1253 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 RNF214Q8ND24 703 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 OR52N2Q8NGI0 321 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 OR5M9Q8NGP3 310 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 HMGCLL1Q8TB92 370 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 MAGEC3Q8TD91 643 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 SKA2Q8WVK7 121 aaPredicted RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 ASZ1Q8WWH4 475 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 PIGTQ969N2 578 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 PPP1R2P1Q96PQ5 205 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 ALS2CR12Q96Q35 445 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 APOL2Q9BQE5 337 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 TRIM5Q9C035 493 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 GBA3Q9H227 469 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 MRPS30Q9NP92 439 aaKnown RBP5.52□□□□□ -1.53
SMG6-219ENST00000575663 SPATA7Q9P0W8 599 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 UVRAGQ9P2Y5 699 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 FAM215AQ9Y5M1 114 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 PRSS21Q9Y6M0 314 aa5.52□□□□□ -1.53
SMG6-219ENST00000575663 A0A0U1RQJ8 604 aa5.51□□□□□ -1.53
SMG6-219ENST00000575663 C3orf70A6NLC5 250 aaPredicted RBP5.51□□□□□ -1.53
SMG6-219ENST00000575663 FAM166BA8MTA8 275 aa5.51□□□□□ -1.53
SMG6-219ENST00000575663 ZNF500O60304 480 aaPredicted RBP5.51□□□□□ -1.53
SMG6-219ENST00000575663 TUBB4AP04350 444 aa5.51□□□□□ -1.53
SMG6-219ENST00000575663 PRSS56P0CW18 603 aa5.51□□□□□ -1.53
SMG6-219ENST00000575663 SKILP12757 684 aa5.51□□□□□ -1.53
SMG6-219ENST00000575663 BMP5P22003 454 aa5.51□□□□□ -1.53
SMG6-219ENST00000575663 MSNP26038 577 aaKnown RBP5.51□□□□□ -1.53
SMG6-219ENST00000575663 ADH7P40394 386 aa5.51□□□□□ -1.53
SMG6-219ENST00000575663 CCNFP41002 786 aa5.51□□□□□ -1.53
SMG6-219ENST00000575663 ZNF75DP51815 510 aa5.51□□□□□ -1.53
SMG6-219ENST00000575663 OR4D2P58180 307 aa5.51□□□□□ -1.53
SMG6-219ENST00000575663 MLF1P58340 268 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms