RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 OR4K3Q96R72 315 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 DHRS4Q9BTZ2 278 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 TMEM184CQ9NVA4 438 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 ZNF180Q9UJW8 692 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 RUVBL1Q9Y265 456 aaKnown RBP12.65□□□□□ -0.38
RPAIN-216ENST00000575599 PTRH2Q9Y3E5 179 aaKnown RBP12.65□□□□□ -0.38
RPAIN-216ENST00000575599 IGSF10Q6WRI0 2623 aa12.65□□□□□ -0.38
RPAIN-216ENST00000575599 MDC1Q14676 2089 aaKnown RBP12.64□□□□□ -0.39
RPAIN-216ENST00000575599 FEZF1A0PJY2 475 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 P2RX6O15547 441 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 RECKO95980 971 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 SNRPAP09012 282 aaKnown RBP12.64□□□□□ -0.39
RPAIN-216ENST00000575599 SLC35E2BP0CK96 405 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 NPPBP16860 134 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 OTX2P32243 289 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 GRK3P35626 688 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 FOLR3P41439 243 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 OR1D4P47884 311 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 ATP6V0D1P61421 351 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 RPS15AP62244 130 aaKnown RBP12.64□□□□□ -0.39
RPAIN-216ENST00000575599 CSNK1G2P78368 415 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 CDKL1Q00532 357 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 MEF2AQ02078 507 aaPredicted RBP12.64□□□□□ -0.39
RPAIN-216ENST00000575599 MUM1Q2TAK8 710 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 PRTGQ2VWP7 1150 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 C18orf21Q32NC0 220 aaPredicted RBP12.64□□□□□ -0.39
RPAIN-216ENST00000575599 TBC1D1Q86TI0 1168 aaPredicted RBP12.64□□□□□ -0.39
RPAIN-216ENST00000575599 DCAKDQ8WVC6 231 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 COL26A1Q96A83 441 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 FAM117AQ9C073 453 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 ENAMQ9NRM1 1142 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 SLC22A11Q9NSA0 550 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 DYRK1BQ9Y463 629 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 KCNMB2Q9Y691 235 aa12.64□□□□□ -0.39
RPAIN-216ENST00000575599 SEC16AO15027 2179 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 ARGFXA6NJG6 315 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 AGPSO00116 658 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 CNOT3O75175 753 aaKnown RBP12.63□□□□□ -0.39
RPAIN-216ENST00000575599 KLF7O75840 302 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-216ENST00000575599 C1QL1O75973 258 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 WDR47O94967 919 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 PIM1P11309 404 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-216ENST00000575599 CRABP2P29373 138 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 HNMTP50135 292 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 CCR8P51685 355 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 RELAQ04206 551 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 CHAF1BQ13112 559 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 KCNAB2Q13303 367 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 RASA2Q15283 850 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 TGFBIQ15582 683 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 OR4D1Q15615 310 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 CATSPEREQ5SY80 951 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 MRPL14Q6P1L8 145 aaKnown RBP12.63□□□□□ -0.39
RPAIN-216ENST00000575599 COX15Q7KZN9 410 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 TMPRSS11BQ86T26 416 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 THOC6Q86W42 341 aaKnown RBP12.63□□□□□ -0.39
RPAIN-216ENST00000575599 GPSM1Q86YR5 675 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 RAB43Q86YS6 212 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 ADAMTS17Q8TE56 1095 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 SLC5A11Q8WWX8 675 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 THAP4Q8WY91 577 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 NEIL2Q969S2 332 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 PTERQ96BW5 349 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 PGM2Q96G03 612 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 MACROD1Q9BQ69 325 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 TMBIM4Q9HC24 238 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 MED4Q9NPJ6 270 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 SNX15Q9NRS6 342 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 WWOXQ9NZC7 414 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 CTSFQ9UBX1 484 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 RNF112Q9ULX5 631 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 SLC22A14Q9Y267 594 aa12.63□□□□□ -0.39
RPAIN-216ENST00000575599 TRIM49D1C9J1S8 452 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 TXNDC9O14530 226 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 DNAJB5O75953 348 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 S100BP04271 92 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-216ENST00000575599 CD63P08962 238 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 FBLP22087 321 aaKnown RBP12.62□□□□□ -0.39
RPAIN-216ENST00000575599 GCAP28676 217 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 BCL6P41182 706 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 GDF5P43026 501 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 IRF9Q00978 393 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 DLG1Q12959 904 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 FBXO48Q5FWF7 155 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 AGBL2Q5U5Z8 902 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 CPZQ66K79 652 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 PRMT9Q6P2P2 845 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 SHISA6Q6ZSJ9 500 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 VN1R4Q7Z5H5 301 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 TMEM151BQ8IW70 566 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 OR2Y1Q8NGV0 311 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 FKBP10Q96AY3 582 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 RHBDF1Q96CC6 855 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 UBXN10Q96LJ8 280 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 SOX17Q9H6I2 414 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-216ENST00000575599 ALG9Q9H6U8 611 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 ZNF304Q9HCX3 659 aa12.62□□□□□ -0.39
RPAIN-216ENST00000575599 GEMIN8Q9NWZ8 242 aaKnown RBP12.62□□□□□ -0.39
RPAIN-216ENST00000575599 CD274Q9NZQ7 290 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms