RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CSHL1Q14406 222 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 SLMAPQ14BN4 828 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 UAP1Q16222 522 aaPredicted RBP8.24□□□□□ -1.09
SMG6-216ENST00000575176 SYT16Q17RD7 645 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 TECRLQ5HYJ1 363 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 CDKL4Q5MAI5 379 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 FAM219BQ5XKK7 198 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 CAPN13Q6MZZ7 669 aaPredicted RBP8.24□□□□□ -1.09
SMG6-216ENST00000575176 SLCO4C1Q6ZQN7 724 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 LAPTM4BQ86VI4 370 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 THOC6Q86W42 341 aaKnown RBP8.24□□□□□ -1.09
SMG6-216ENST00000575176 C17orf64Q86WR6 236 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 CTAGE3PQ8IX95 158 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 CEP112Q8N8E3 955 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 ZSCAN1Q8NBB4 408 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 MFSD9Q8NBP5 474 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 KCTD4Q8WVF5 259 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 SLC5A11Q8WWX8 675 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 CDKL2Q92772 493 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 ESAMQ96AP7 390 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 MVB12AQ96EY5 273 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 ABHD17AQ96GS6 310 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 SMIM10Q96HG1 83 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 NDC1Q9BTX1 674 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 NUDT9Q9BW91 350 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 TGIF2Q9GZN2 237 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 SLC6A16Q9GZN6 736 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 PCBD2Q9H0N5 130 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 ZNF358Q9NW07 568 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 TLK1Q9UKI8 766 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 SLC22A14Q9Y267 594 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 TP53TG5Q9Y2B4 290 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 CLDN16Q9Y5I7 305 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 MAU2Q9Y6X3 613 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 EXPH5Q8NEV8 1989 aa8.24□□□□□ -1.09
SMG6-216ENST00000575176 HIVEP3Q5T1R4 2406 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 A0A0A6YYC8 382 aaPredicted RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 TRBC2A0A5B9 178 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 LRRC14BA6NHZ5 514 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 C9J4A7 227 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 I3L1I5 382 aaPredicted RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 UBXN8O00124 270 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 RIPK2O43353 540 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 ZNF500O60304 480 aaPredicted RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 ALOX12BO75342 701 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 JRKO75564 520 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 RFPL1O75677 317 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 NSA2O95478 260 aaKnown RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 RHOXF2BP0C7M4 288 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 PLA2G2AP14555 144 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 TFEBP19484 476 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 MMP11P24347 488 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 HRH2P25021 359 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 VARSP26640 1264 aaKnown RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 CD97P48960 835 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 AGTR2P50052 363 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 HNMTP50135 292 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 SOX8P57073 446 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 ATP6V0D1P61421 351 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 RPS15P62841 145 aaKnown RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 MAT1AQ00266 395 aaKnown RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 KLC1Q07866 573 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 TSTA3Q13630 321 aaPredicted RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 FAM53BQ14153 422 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 MUM1Q2TAK8 710 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 ADPRMQ3LIE5 342 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 TAF1BQ53T94 588 aaPredicted RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 VWA2Q5GFL6 755 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 MROH9Q5TGP6 573 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 GARNL3Q5VVW2 1013 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 PRMT9Q6P2P2 845 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 NXPE4Q6UWF7 544 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 KIRREL2Q6UWL6 708 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 SHISA6Q6ZSJ9 500 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 SH2D5Q6ZV89 423 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMG6-216ENST00000575176 TTC29Q8NA56 475 aaPredicted RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 OR9A4Q8NGU2 314 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 NT5CQ8TCD5 201 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 STT3BQ8TCJ2 826 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 APOBEC4Q8WW27 367 aaKnown RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 THAP4Q8WY91 577 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 IFT81Q8WYA0 676 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 NXNL1Q96CM4 212 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 THAP11Q96EK4 314 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 TSPAN17Q96FV3 270 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 CYTH2Q99418 400 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 WDR77Q9BQA1 342 aaPredicted RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 RHOXF2Q9BQY4 288 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 HAUS8Q9BT25 410 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 DRC3Q9H069 523 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 SLC25A18Q9H1K4 315 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 ALG9Q9H6U8 611 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 PELI2Q9HAT8 420 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 LANCL2Q9NS86 450 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 ABCF3Q9NUQ8 709 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 WDR70Q9NW82 654 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 IFT80Q9P2H3 777 aaPredicted RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 CTNNAL1Q9UBT7 734 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 ZNF180Q9UJW8 692 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms