RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 DEFB110Q30KQ9 67 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 RBM12BQ8IXT5 1001 aaKnown RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 SDR16C5Q8N3Y7 309 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 FRMD1Q8N878 549 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 OR6C2Q9NZP2 312 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 PCTPQ9UKL6 214 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 MAP4K5Q9Y4K4 846 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 CLCA3PQ9Y6N3 262 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 A0A1W2PRB8 838 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 C1orf105O95561 183 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 CD160O95971 181 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 COL9A1P20849 921 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 AQP1P29972 269 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 ADSLP30566 484 aaPredicted RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 COPZ1P61923 177 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 SIGLEC14Q08ET2 396 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 ZNF155Q12901 538 aaPredicted RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 EIF4EBP2Q13542 120 aaPredicted RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 C10orf62Q5T681 223 aaPredicted RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 FAAH2Q6GMR7 532 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 CSNK1A1LQ8N752 337 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 KCT2Q8NC54 265 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 DENND1AQ8TEH3 1009 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 ZNF480Q8WV37 535 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 VWCEQ96DN2 955 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 F2RL3Q96RI0 385 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 SLC30A3Q99726 388 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 RDH14Q9HBH5 336 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 WSB2Q9NYS7 404 aaPredicted RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 ACTR10Q9NZ32 417 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 EGFL7Q9UHF1 273 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 DLGAP4Q9Y2H0 992 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 E7EQ34 232 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 TNFRSF10CO14798 259 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 PIM1P11309 404 aaPredicted RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 ADARP55265 1226 aaKnown RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 MESP2Q0VG99 397 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 CCINQ13939 588 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 TECPR1Q7Z6L1 1165 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 OR2T12Q8NG77 320 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 CEP76Q8TAP6 659 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 MSLNLQ96KJ4 702 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 BIRC8Q96P09 236 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 NECAB3Q96P71 396 aaPredicted RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 MMADHCQ9H3L0 296 aaPredicted RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 RNPEPL1Q9HAU8 725 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 ZCCHC3Q9NUD5 404 aaKnown RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 MAP10Q9P2G4 905 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 ATP6V1HQ9UI12 483 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 PHF11Q9UIL8 331 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 PLEKHM1Q9Y4G2 1056 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 G6PDP11413 515 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 MSX2P35548 267 aaPredicted RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 CLCN7P51798 805 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 ACVR1Q04771 509 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 TMED1Q13445 227 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 CDKL4Q5MAI5 379 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 CATSPEREQ5SY80 951 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 LMNTD1Q8N9Z9 388 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 CLPTM1LQ96KA5 538 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 SH3GL3Q99963 347 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 HOPXQ9BPY8 73 aaPredicted RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 WDR83Q9BRX9 315 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 RTKNQ9BST9 563 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 SPATA5L1Q9BVQ7 753 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 UGT2B28Q9BY64 529 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 EPHX3Q9H6B9 360 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 CCDC134Q9H6E4 229 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 COPS7AQ9UBW8 275 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 TMED5Q9Y3A6 229 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 GLOD5A6NK44 160 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 G3V2L1 256 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 TOR1BO14657 336 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 PDYNP01213 254 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 GCAP28676 217 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 CLK3P49761 638 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 NCBP2P52298 156 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMG6-213ENST00000573166 KIAA1024LP59773 190 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 RPS15AP62244 130 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 MRPS35P82673 323 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 KIR2DS3Q14952 304 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 C6orf136Q5SQH8 315 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 SLC22A15Q8IZD6 547 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 LGR4Q9BXB1 951 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 RBCK1Q9BYM8 510 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 DENND2DQ9H6A0 471 aaPredicted RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 PNO1Q9NRX1 252 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 POT1Q9NUX5 634 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 TMEM184CQ9NVA4 438 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 STX18Q9P2W9 335 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 PCDHGB3Q9Y5G1 929 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 METTL12A8MUP2 240 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 GTPBP1O00178 669 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 POU1F1P28069 291 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 DGKQP52824 942 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 SH3BP2P78314 561 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 MRPS22P82650 360 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 HYAL2Q12891 473 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 ARHGAP19Q14CB8 494 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 PCBP2Q15366 365 aaKnown RBP eCLIP9.74□□□□□ -0.851e-13■■■■■ 44.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms